Gene : Glyma.16G207100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13069:SF11 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6 Genomic Order:  2071
Name:  ? Glyma.16G207100 Secondary Identifier:  ? PAC:30559113
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6829 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G207100 0.5kb upstream 0.5kb upstream 3789 true Chr16: 36700976-36704764 Glycine max
Glyma.16G207100 0.5kb upstream 0.5kb upstream 500 false Chr16: 36700976-36701475 Glycine max
Glyma.16G207100 0.5kb downstream 0.5kb downstream 3789 true Chr16: 36701476-36705264 Glycine max
Glyma.16G207100 0.5kb downstream 0.5kb downstream 500 false Chr16: 36704765-36705264 Glycine max
Glyma.16G207100 1.0kb upstream 1.0kb upstream 4289 true Chr16: 36700476-36704764 Glycine max
Glyma.16G207100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36700476-36701475 Glycine max
Glyma.16G207100 1.0kb downstream 1.0kb downstream 4289 true Chr16: 36701476-36705764 Glycine max
Glyma.16G207100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36704765-36705764 Glycine max
Glyma.16G207100 2.0kb upstream 2.0kb upstream 5289 true Chr16: 36699476-36704764 Glycine max
Glyma.16G207100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36699476-36701475 Glycine max
Glyma.16G207100 2.0kb downstream 2.0kb downstream 5289 true Chr16: 36701476-36706764 Glycine max
Glyma.16G207100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36704765-36706764 Glycine max
Glyma.16G207100 5.0kb upstream 5.0kb upstream 8289 true Chr16: 36696476-36704764 Glycine max
Glyma.16G207100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36696476-36701475 Glycine max
Glyma.16G207100 5.0kb downstream 5.0kb downstream 8289 true Chr16: 36701476-36709764 Glycine max
Glyma.16G207100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36704765-36709764 Glycine max
Glyma.16G207100 10.0kb upstream 10.0kb upstream 13289 true Chr16: 36691476-36704764 Glycine max
Glyma.16G207100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36691476-36701475 Glycine max
Glyma.16G207100 10.0kb downstream 10.0kb downstream 13289 true Chr16: 36701476-36714764 Glycine max
Glyma.16G207100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36704765-36714764 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299166 5265 Fabidae View MSA
124065403 5270 Rosid View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.82773 0.0 22.7084    
cufflinks 3.78583 0.0 13.149   Low
cufflinks 3.30755 0.0 12.1775   Low
cufflinks 5.32753 0.0 24.5904    
cufflinks 4.74473 0.0 15.7679    
cufflinks 5.64805 0.0 24.4716    
cufflinks 6.05721 0.0 18.4135   High
cufflinks 5.03894 0.0 15.865    
cufflinks 4.39515 0.0 14.807    
cufflinks 0.663       High
cufflinks 0.417        
cufflinks 0.64       High
cufflinks 0.602       High
cufflinks 0.583        
cufflinks 0.394       Low
cufflinks 0.439        
cufflinks 0.378       Low
cufflinks 0.629       High
cufflinks 0.492        
cufflinks 0.516        
cufflinks 0.43        
cufflinks 0.517        
cufflinks 0.431        
cufflinks 0.444        
cufflinks 0.506        
cufflinks 0.38       Low

0 Strain