Gene : Glyma.16G189100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11655:SF14 - 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL Genomic Order:  1891
Name:  ? Glyma.16G189100 Secondary Identifier:  ? PAC:30560341
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G189100 0.5kb upstream 0.5kb upstream 4198 true Chr16: 35170253-35174450 Glycine max
Glyma.16G189100 0.5kb upstream 0.5kb upstream 500 false Chr16: 35173951-35174450 Glycine max
Glyma.16G189100 0.5kb downstream 0.5kb downstream 4198 true Chr16: 35169753-35173950 Glycine max
Glyma.16G189100 0.5kb downstream 0.5kb downstream 500 false Chr16: 35169753-35170252 Glycine max
Glyma.16G189100 1.0kb upstream 1.0kb upstream 4698 true Chr16: 35170253-35174950 Glycine max
Glyma.16G189100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 35173951-35174950 Glycine max
Glyma.16G189100 1.0kb downstream 1.0kb downstream 4698 true Chr16: 35169253-35173950 Glycine max
Glyma.16G189100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 35169253-35170252 Glycine max
Glyma.16G189100 2.0kb upstream 2.0kb upstream 5698 true Chr16: 35170253-35175950 Glycine max
Glyma.16G189100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 35173951-35175950 Glycine max
Glyma.16G189100 2.0kb downstream 2.0kb downstream 5698 true Chr16: 35168253-35173950 Glycine max
Glyma.16G189100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 35168253-35170252 Glycine max
Glyma.16G189100 5.0kb upstream 5.0kb upstream 8698 true Chr16: 35170253-35178950 Glycine max
Glyma.16G189100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 35173951-35178950 Glycine max
Glyma.16G189100 5.0kb downstream 5.0kb downstream 8698 true Chr16: 35165253-35173950 Glycine max
Glyma.16G189100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 35165253-35170252 Glycine max
Glyma.16G189100 10.0kb upstream 10.0kb upstream 13698 true Chr16: 35170253-35183950 Glycine max
Glyma.16G189100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 35173951-35183950 Glycine max
Glyma.16G189100 10.0kb downstream 10.0kb downstream 13698 true Chr16: 35160253-35173950 Glycine max
Glyma.16G189100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 35160253-35170252 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303745 5265 Fabidae View MSA
124063333 5270 Rosid View MSA
123740010 5271 Pentapetalae View MSA
122786185 5272 Eudicot View MSA
122045909 5273 Angiosperm View MSA
121344403 5274 Embryophyte View MSA
123424152 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.8634 0.0 87.7327 High High
cufflinks 37.1666 0.0 99.4508 High High
cufflinks 5.98035 0.0 17.9288   Low
cufflinks 14.0221 0.0 38.3904    
cufflinks 8.70116 0.0 25.0367    
cufflinks 9.13486 0.0 26.1042    
cufflinks 10.5183 0.0 29.5888    
cufflinks 14.1587 0.0 38.7294    
cufflinks 5.1951 0.0 15.975   Low
cufflinks 9.276     High  
cufflinks 0.278       Low
cufflinks 5.146        
cufflinks 2.181        
cufflinks 2.749        
cufflinks 0.401       Low
cufflinks 54.013     High High
cufflinks 0.552        
cufflinks 5.923        
cufflinks 10.741     High  
cufflinks 60.618     High High
cufflinks 0.362       Low
cufflinks 50.782     High High
cufflinks 48.703     High High
cufflinks 0.308       Low
cufflinks 61.439     High High
cufflinks 0.578        

0 Strain