Gene : Glyma.16G189400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641:SF563 - MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  1894
Name:  ? Glyma.16G189400 Secondary Identifier:  ? PAC:30560350
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G189400 0.5kb upstream 0.5kb upstream 3306 true Chr16: 35198961-35202266 Glycine max
Glyma.16G189400 0.5kb upstream 0.5kb upstream 500 false Chr16: 35198961-35199460 Glycine max
Glyma.16G189400 0.5kb downstream 0.5kb downstream 3306 true Chr16: 35199461-35202766 Glycine max
Glyma.16G189400 0.5kb downstream 0.5kb downstream 500 false Chr16: 35202267-35202766 Glycine max
Glyma.16G189400 1.0kb upstream 1.0kb upstream 3806 true Chr16: 35198461-35202266 Glycine max
Glyma.16G189400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 35198461-35199460 Glycine max
Glyma.16G189400 1.0kb downstream 1.0kb downstream 3806 true Chr16: 35199461-35203266 Glycine max
Glyma.16G189400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 35202267-35203266 Glycine max
Glyma.16G189400 2.0kb upstream 2.0kb upstream 4806 true Chr16: 35197461-35202266 Glycine max
Glyma.16G189400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 35197461-35199460 Glycine max
Glyma.16G189400 2.0kb downstream 2.0kb downstream 4806 true Chr16: 35199461-35204266 Glycine max
Glyma.16G189400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 35202267-35204266 Glycine max
Glyma.16G189400 5.0kb upstream 5.0kb upstream 7806 true Chr16: 35194461-35202266 Glycine max
Glyma.16G189400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 35194461-35199460 Glycine max
Glyma.16G189400 5.0kb downstream 5.0kb downstream 7806 true Chr16: 35199461-35207266 Glycine max
Glyma.16G189400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 35202267-35207266 Glycine max
Glyma.16G189400 10.0kb upstream 10.0kb upstream 12806 true Chr16: 35189461-35202266 Glycine max
Glyma.16G189400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 35189461-35199460 Glycine max
Glyma.16G189400 10.0kb downstream 10.0kb downstream 12806 true Chr16: 35199461-35212266 Glycine max
Glyma.16G189400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 35202267-35212266 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309143 5265 Fabidae View MSA
124067313 5270 Rosid View MSA
123750706 5271 Pentapetalae View MSA
122786386 5272 Eudicot View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.243471 0.0 0.942379    
cufflinks 0.0916887 0.0 0.370179 Low  
cufflinks 0.227919 0.0 0.881356    
cufflinks 0.0929287 0.0 0.372255 Low  
cufflinks 3.32766 0.0 14.8274    
cufflinks 63.4903 0.0 245.509 High High
cufflinks 0.0582934 0.0 0.24041 Low Low
cufflinks 0.897321 0.0 4.08879    
cufflinks 9.81062 0.0 36.9267   High
cufflinks 0.214        
cufflinks 1.251        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.288     High High
cufflinks 1.07        
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.276        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.519        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 1.021        
cufflinks 0.003     Low Low
cufflinks 1.176        

0 Strain