Gene : Glyma.16G189900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  1899
Name:  ? Glyma.16G189900 Secondary Identifier:  ? PAC:30559903
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G189900 0.5kb upstream 0.5kb upstream 4769 true Chr16: 35235267-35240035 Glycine max
Glyma.16G189900 0.5kb upstream 0.5kb upstream 500 false Chr16: 35235267-35235766 Glycine max
Glyma.16G189900 0.5kb downstream 0.5kb downstream 4769 true Chr16: 35235767-35240535 Glycine max
Glyma.16G189900 0.5kb downstream 0.5kb downstream 500 false Chr16: 35240036-35240535 Glycine max
Glyma.16G189900 1.0kb upstream 1.0kb upstream 5269 true Chr16: 35234767-35240035 Glycine max
Glyma.16G189900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 35234767-35235766 Glycine max
Glyma.16G189900 1.0kb downstream 1.0kb downstream 5269 true Chr16: 35235767-35241035 Glycine max
Glyma.16G189900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 35240036-35241035 Glycine max
Glyma.16G189900 2.0kb upstream 2.0kb upstream 6269 true Chr16: 35233767-35240035 Glycine max
Glyma.16G189900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 35233767-35235766 Glycine max
Glyma.16G189900 2.0kb downstream 2.0kb downstream 6269 true Chr16: 35235767-35242035 Glycine max
Glyma.16G189900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 35240036-35242035 Glycine max
Glyma.16G189900 5.0kb upstream 5.0kb upstream 9269 true Chr16: 35230767-35240035 Glycine max
Glyma.16G189900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 35230767-35235766 Glycine max
Glyma.16G189900 5.0kb downstream 5.0kb downstream 9269 true Chr16: 35235767-35245035 Glycine max
Glyma.16G189900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 35240036-35245035 Glycine max
Glyma.16G189900 10.0kb upstream 10.0kb upstream 14269 true Chr16: 35225767-35240035 Glycine max
Glyma.16G189900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 35225767-35235766 Glycine max
Glyma.16G189900 10.0kb downstream 10.0kb downstream 14269 true Chr16: 35235767-35250035 Glycine max
Glyma.16G189900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 35240036-35250035 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313287 5265 Fabidae View MSA
124069753 5270 Rosid View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00661495 0.0 0.0338099 Low Low
cufflinks 0.720724 0.0 3.77308    
cufflinks 0.510193 0.0 2.85473    
cufflinks 0.287589 0.0 1.31927    
cufflinks 0.270308 0.0 1.27434    
cufflinks 0.740423 0.0 3.90727    
cufflinks 16.6892 0.0 59.6332   High
cufflinks 0.112474 0.0 0.574597 Low  
cufflinks 0.0390092 0.0 0.156968 Low  
cufflinks 0.013     Low  
cufflinks 0.002     Low Low
cufflinks 0.053     Low High
cufflinks 0.029     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.06     Low High
cufflinks 0.052     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.002     Low Low

0 Strain