Gene : Glyma.16G196200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10015:SF168 - HEAT STRESS TRANSCRIPTION FACTOR B-2A Genomic Order:  1962
Name:  ? Glyma.16G196200 Secondary Identifier:  ? PAC:30560908
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G196200 0.5kb upstream 0.5kb upstream 2175 true Chr16: 35759678-35761852 Glycine max
Glyma.16G196200 0.5kb upstream 0.5kb upstream 500 false Chr16: 35759678-35760177 Glycine max
Glyma.16G196200 0.5kb downstream 0.5kb downstream 2175 true Chr16: 35760178-35762352 Glycine max
Glyma.16G196200 0.5kb downstream 0.5kb downstream 500 false Chr16: 35761853-35762352 Glycine max
Glyma.16G196200 1.0kb upstream 1.0kb upstream 2675 true Chr16: 35759178-35761852 Glycine max
Glyma.16G196200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 35759178-35760177 Glycine max
Glyma.16G196200 1.0kb downstream 1.0kb downstream 2675 true Chr16: 35760178-35762852 Glycine max
Glyma.16G196200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 35761853-35762852 Glycine max
Glyma.16G196200 2.0kb upstream 2.0kb upstream 3675 true Chr16: 35758178-35761852 Glycine max
Glyma.16G196200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 35758178-35760177 Glycine max
Glyma.16G196200 2.0kb downstream 2.0kb downstream 3675 true Chr16: 35760178-35763852 Glycine max
Glyma.16G196200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 35761853-35763852 Glycine max
Glyma.16G196200 5.0kb upstream 5.0kb upstream 6675 true Chr16: 35755178-35761852 Glycine max
Glyma.16G196200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 35755178-35760177 Glycine max
Glyma.16G196200 5.0kb downstream 5.0kb downstream 6675 true Chr16: 35760178-35766852 Glycine max
Glyma.16G196200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 35761853-35766852 Glycine max
Glyma.16G196200 10.0kb upstream 10.0kb upstream 11675 true Chr16: 35750178-35761852 Glycine max
Glyma.16G196200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 35750178-35760177 Glycine max
Glyma.16G196200 10.0kb downstream 10.0kb downstream 11675 true Chr16: 35760178-35771852 Glycine max
Glyma.16G196200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 35761853-35771852 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307656 5265 Fabidae View MSA
124071788 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4303 0.0 36.0154    
cufflinks 5.47911 0.0 15.8512    
cufflinks 45.2089 0.0 124.668 High High
cufflinks 7.35294 0.0 20.5827    
cufflinks 13.0752 0.0 35.0447    
cufflinks 15.0018 0.0 40.1171    
cufflinks 3.32892 0.0 10.2382   Low
cufflinks 17.1957 0.0 45.9134    
cufflinks 10.6344 0.0 28.8456    
cufflinks 15.888     High  
cufflinks 25.014     High High
cufflinks 21.861     High  
cufflinks 5.916        
cufflinks 2.505       Low
cufflinks 23.431     High  
cufflinks 3.741       Low
cufflinks 43.357     High High
cufflinks 12.539     High  
cufflinks 5.361        
cufflinks 4.361       Low
cufflinks 19.472     High  
cufflinks 4.493        
cufflinks 6.935        
cufflinks 20.763     High  
cufflinks 4.702        
cufflinks 24.565     High  

0 Strain