Gene : Glyma.16G197100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR35501:SF2 - PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN-RELATED Genomic Order:  1971
Name:  ? Glyma.16G197100 Secondary Identifier:  ? PAC:30559790
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G197100 0.5kb upstream 0.5kb upstream 1384 true Chr16: 35851358-35852741 Glycine max
Glyma.16G197100 0.5kb upstream 0.5kb upstream 500 false Chr16: 35852242-35852741 Glycine max
Glyma.16G197100 0.5kb downstream 0.5kb downstream 1384 true Chr16: 35850858-35852241 Glycine max
Glyma.16G197100 0.5kb downstream 0.5kb downstream 500 false Chr16: 35850858-35851357 Glycine max
Glyma.16G197100 1.0kb upstream 1.0kb upstream 1884 true Chr16: 35851358-35853241 Glycine max
Glyma.16G197100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 35852242-35853241 Glycine max
Glyma.16G197100 1.0kb downstream 1.0kb downstream 1884 true Chr16: 35850358-35852241 Glycine max
Glyma.16G197100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 35850358-35851357 Glycine max
Glyma.16G197100 2.0kb upstream 2.0kb upstream 2884 true Chr16: 35851358-35854241 Glycine max
Glyma.16G197100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 35852242-35854241 Glycine max
Glyma.16G197100 2.0kb downstream 2.0kb downstream 2884 true Chr16: 35849358-35852241 Glycine max
Glyma.16G197100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 35849358-35851357 Glycine max
Glyma.16G197100 5.0kb upstream 5.0kb upstream 5884 true Chr16: 35851358-35857241 Glycine max
Glyma.16G197100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 35852242-35857241 Glycine max
Glyma.16G197100 5.0kb downstream 5.0kb downstream 5884 true Chr16: 35846358-35852241 Glycine max
Glyma.16G197100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 35846358-35851357 Glycine max
Glyma.16G197100 10.0kb upstream 10.0kb upstream 10884 true Chr16: 35851358-35862241 Glycine max
Glyma.16G197100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 35852242-35862241 Glycine max
Glyma.16G197100 10.0kb downstream 10.0kb downstream 10884 true Chr16: 35841358-35852241 Glycine max
Glyma.16G197100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 35841358-35851357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309728 5265 Fabidae View MSA
124050324 5270 Rosid View MSA
123739787 5271 Pentapetalae View MSA
122794916 5272 Eudicot View MSA
122045220 5273 Angiosperm View MSA
121310419 5274 Embryophyte View MSA
123347907 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.6506 0.0 19.4841    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.962     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain