Gene : Glyma.16G181500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11165//PTHR11165:SF61 - SKP1 Genomic Order:  1815
Name:  ? Glyma.16G181500 Secondary Identifier:  ? PAC:30559057
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G181500 0.5kb upstream 0.5kb upstream 8284 true Chr16: 34245593-34253876 Glycine max
Glyma.16G181500 0.5kb upstream 0.5kb upstream 500 false Chr16: 34245593-34246092 Glycine max
Glyma.16G181500 0.5kb downstream 0.5kb downstream 8284 true Chr16: 34246093-34254376 Glycine max
Glyma.16G181500 0.5kb downstream 0.5kb downstream 500 false Chr16: 34253877-34254376 Glycine max
Glyma.16G181500 1.0kb upstream 1.0kb upstream 8784 true Chr16: 34245093-34253876 Glycine max
Glyma.16G181500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 34245093-34246092 Glycine max
Glyma.16G181500 1.0kb downstream 1.0kb downstream 8784 true Chr16: 34246093-34254876 Glycine max
Glyma.16G181500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 34253877-34254876 Glycine max
Glyma.16G181500 2.0kb upstream 2.0kb upstream 9784 true Chr16: 34244093-34253876 Glycine max
Glyma.16G181500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 34244093-34246092 Glycine max
Glyma.16G181500 2.0kb downstream 2.0kb downstream 9784 true Chr16: 34246093-34255876 Glycine max
Glyma.16G181500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 34253877-34255876 Glycine max
Glyma.16G181500 5.0kb upstream 5.0kb upstream 12784 true Chr16: 34241093-34253876 Glycine max
Glyma.16G181500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 34241093-34246092 Glycine max
Glyma.16G181500 5.0kb downstream 5.0kb downstream 12784 true Chr16: 34246093-34258876 Glycine max
Glyma.16G181500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 34253877-34258876 Glycine max
Glyma.16G181500 10.0kb upstream 10.0kb upstream 17784 true Chr16: 34236093-34253876 Glycine max
Glyma.16G181500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 34236093-34246092 Glycine max
Glyma.16G181500 10.0kb downstream 10.0kb downstream 17784 true Chr16: 34246093-34263876 Glycine max
Glyma.16G181500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 34253877-34263876 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122306501 5265 Fabidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.51724 0.0 23.321    
cufflinks 4.87453 0.0 37.8185   High
cufflinks 5.85672 0.0 36.9472   High
cufflinks 3.35615 0.0 26.1953    
cufflinks 1.78914 0.0 16.3557   Low
cufflinks 2.4573 0.0 18.0076    
cufflinks 3.53218 0.0 27.9154    
cufflinks 2.69781 0.0 26.8105    
cufflinks 2.32407 0.0 24.3708    
cufflinks 0.05     Low  
cufflinks 0.058        
cufflinks 0.089     Low  
cufflinks 0.033     Low Low
cufflinks 0.028     Low Low
cufflinks 0.032     Low Low
cufflinks 0.083     Low  
cufflinks 0.04     Low  
cufflinks 0.085     Low  
cufflinks 0.082     Low  
cufflinks 0.116       High
cufflinks 0.043     Low  
cufflinks 0.092     Low  
cufflinks 0.08     Low  
cufflinks 0.061        
cufflinks 0.11       High
cufflinks 0.026     Low Low

0 Strain