Gene : Glyma.16G188900 G. max Wm82.a2.v1
Defline:  (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase Genomic Order:  1889
Name:  ? Glyma.16G188900 Secondary Identifier:  ? PAC:30560375
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G188900 0.5kb upstream 0.5kb upstream 6178 true Chr16: 35153535-35159712 Glycine max
Glyma.16G188900 0.5kb upstream 0.5kb upstream 500 false Chr16: 35159213-35159712 Glycine max
Glyma.16G188900 0.5kb downstream 0.5kb downstream 6178 true Chr16: 35153035-35159212 Glycine max
Glyma.16G188900 0.5kb downstream 0.5kb downstream 500 false Chr16: 35153035-35153534 Glycine max
Glyma.16G188900 1.0kb upstream 1.0kb upstream 6678 true Chr16: 35153535-35160212 Glycine max
Glyma.16G188900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 35159213-35160212 Glycine max
Glyma.16G188900 1.0kb downstream 1.0kb downstream 6678 true Chr16: 35152535-35159212 Glycine max
Glyma.16G188900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 35152535-35153534 Glycine max
Glyma.16G188900 2.0kb upstream 2.0kb upstream 7678 true Chr16: 35153535-35161212 Glycine max
Glyma.16G188900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 35159213-35161212 Glycine max
Glyma.16G188900 2.0kb downstream 2.0kb downstream 7678 true Chr16: 35151535-35159212 Glycine max
Glyma.16G188900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 35151535-35153534 Glycine max
Glyma.16G188900 5.0kb upstream 5.0kb upstream 10678 true Chr16: 35153535-35164212 Glycine max
Glyma.16G188900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 35159213-35164212 Glycine max
Glyma.16G188900 5.0kb downstream 5.0kb downstream 10678 true Chr16: 35148535-35159212 Glycine max
Glyma.16G188900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 35148535-35153534 Glycine max
Glyma.16G188900 10.0kb upstream 10.0kb upstream 15678 true Chr16: 35153535-35169212 Glycine max
Glyma.16G188900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 35159213-35169212 Glycine max
Glyma.16G188900 10.0kb downstream 10.0kb downstream 15678 true Chr16: 35143535-35159212 Glycine max
Glyma.16G188900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 35143535-35153534 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309686 5265 Fabidae View MSA
124071694 5270 Rosid View MSA
123749767 5271 Pentapetalae View MSA
122786856 5272 Eudicot View MSA
122044328 5273 Angiosperm View MSA
121310279 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.164299 0.0 0.631815 Low  
cufflinks 2.91181E-4 0.0 0.00356013 Low Low
cufflinks 0.0430069 0.0 0.1743 Low  
cufflinks 0.00596991 0.0 0.028313 Low  
cufflinks 0.00157907 0.0 0.00912366 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.92083 0.0 16.3997   High
cufflinks 0.113429 0.0 0.443022 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.138       High
cufflinks 0.288       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain