Gene : Glyma.16G177100 G. max Wm82.a2.v1
Defline:  (1 of 7) PF04278 - Tic22-like family (Tic22) Genomic Order:  1771
Name:  ? Glyma.16G177100 Secondary Identifier:  ? PAC:30560446
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G177100 0.5kb upstream 0.5kb upstream 6976 true Chr16: 33846088-33853063 Glycine max
Glyma.16G177100 0.5kb upstream 0.5kb upstream 500 false Chr16: 33852564-33853063 Glycine max
Glyma.16G177100 0.5kb downstream 0.5kb downstream 6976 true Chr16: 33845588-33852563 Glycine max
Glyma.16G177100 0.5kb downstream 0.5kb downstream 500 false Chr16: 33845588-33846087 Glycine max
Glyma.16G177100 1.0kb upstream 1.0kb upstream 7476 true Chr16: 33846088-33853563 Glycine max
Glyma.16G177100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 33852564-33853563 Glycine max
Glyma.16G177100 1.0kb downstream 1.0kb downstream 7476 true Chr16: 33845088-33852563 Glycine max
Glyma.16G177100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 33845088-33846087 Glycine max
Glyma.16G177100 2.0kb upstream 2.0kb upstream 8476 true Chr16: 33846088-33854563 Glycine max
Glyma.16G177100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 33852564-33854563 Glycine max
Glyma.16G177100 2.0kb downstream 2.0kb downstream 8476 true Chr16: 33844088-33852563 Glycine max
Glyma.16G177100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 33844088-33846087 Glycine max
Glyma.16G177100 5.0kb upstream 5.0kb upstream 11476 true Chr16: 33846088-33857563 Glycine max
Glyma.16G177100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 33852564-33857563 Glycine max
Glyma.16G177100 5.0kb downstream 5.0kb downstream 11476 true Chr16: 33841088-33852563 Glycine max
Glyma.16G177100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 33841088-33846087 Glycine max
Glyma.16G177100 10.0kb upstream 10.0kb upstream 16476 true Chr16: 33846088-33862563 Glycine max
Glyma.16G177100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 33852564-33862563 Glycine max
Glyma.16G177100 10.0kb downstream 10.0kb downstream 16476 true Chr16: 33836088-33852563 Glycine max
Glyma.16G177100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 33836088-33846087 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304584 5265 Fabidae View MSA
124063444 5270 Rosid View MSA
123744483 5271 Pentapetalae View MSA
122790475 5272 Eudicot View MSA
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0143 0.0 38.6057   High
cufflinks 3.65023 0.0 13.874    
cufflinks 4.7063 0.0 19.2538    
cufflinks 3.62818 0.0 13.6694    
cufflinks 5.55698 0.0 21.5322    
cufflinks 4.33537 0.0 15.5125    
cufflinks 4.82595 0.0 19.9938    
cufflinks 2.84727 0.0 11.5442   Low
cufflinks 4.85569 0.0 19.5551    
cufflinks 0.537       Low
cufflinks 1.361       High
cufflinks 0.825        
cufflinks 0.872        
cufflinks 0.939        
cufflinks 1.296       High
cufflinks 1.026        
cufflinks 0.524       Low
cufflinks 0.722        
cufflinks 0.703        
cufflinks 1.097        
cufflinks 1.305       High
cufflinks 0.989        
cufflinks 1.043        
cufflinks 1.313       High
cufflinks 0.998        
cufflinks 0.952        

0 Strain