Gene : Glyma.16G177800 G. max Wm82.a2.v1
Defline:  (1 of 3) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Genomic Order:  1778
Name:  ? Glyma.16G177800 Secondary Identifier:  ? PAC:30562125
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G177800 0.5kb upstream 0.5kb upstream 2264 true Chr16: 33882491-33884754 Glycine max
Glyma.16G177800 0.5kb upstream 0.5kb upstream 500 false Chr16: 33882491-33882990 Glycine max
Glyma.16G177800 0.5kb downstream 0.5kb downstream 2264 true Chr16: 33882991-33885254 Glycine max
Glyma.16G177800 0.5kb downstream 0.5kb downstream 500 false Chr16: 33884755-33885254 Glycine max
Glyma.16G177800 1.0kb upstream 1.0kb upstream 2764 true Chr16: 33881991-33884754 Glycine max
Glyma.16G177800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 33881991-33882990 Glycine max
Glyma.16G177800 1.0kb downstream 1.0kb downstream 2764 true Chr16: 33882991-33885754 Glycine max
Glyma.16G177800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 33884755-33885754 Glycine max
Glyma.16G177800 2.0kb upstream 2.0kb upstream 3764 true Chr16: 33880991-33884754 Glycine max
Glyma.16G177800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 33880991-33882990 Glycine max
Glyma.16G177800 2.0kb downstream 2.0kb downstream 3764 true Chr16: 33882991-33886754 Glycine max
Glyma.16G177800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 33884755-33886754 Glycine max
Glyma.16G177800 5.0kb upstream 5.0kb upstream 6764 true Chr16: 33877991-33884754 Glycine max
Glyma.16G177800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 33877991-33882990 Glycine max
Glyma.16G177800 5.0kb downstream 5.0kb downstream 6764 true Chr16: 33882991-33889754 Glycine max
Glyma.16G177800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 33884755-33889754 Glycine max
Glyma.16G177800 10.0kb upstream 10.0kb upstream 11764 true Chr16: 33872991-33884754 Glycine max
Glyma.16G177800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 33872991-33882990 Glycine max
Glyma.16G177800 10.0kb downstream 10.0kb downstream 11764 true Chr16: 33882991-33894754 Glycine max
Glyma.16G177800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 33884755-33894754 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308704 5265 Fabidae View MSA
124067243 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.9514 0.0 91.4559 High High
cufflinks 12.1842 0.0 33.0598    
cufflinks 20.5824 0.0 54.9127 High High
cufflinks 3.48687 0.0 10.8723    
cufflinks 0.533389 0.0 1.98679   Low
cufflinks 0.361046 0.0 1.36733   Low
cufflinks 2.18524 0.0 7.29788    
cufflinks 4.16215 0.0 12.6863    
cufflinks 0.810004 0.0 2.94655    
cufflinks 3.006        
cufflinks 0.011     Low Low
cufflinks 8.622     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 26.83     High  
cufflinks 0.018     Low Low
cufflinks 6.159        
cufflinks 6.428        
cufflinks 45.769     High  
cufflinks 0.067       Low
cufflinks 39.204     High  
cufflinks 39.041     High  
cufflinks 0.022     Low Low
cufflinks 36.92     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain