Gene : Glyma.16G179300 G. max Wm82.a2.v1
Genomic Order:  1793 Name:  ? Glyma.16G179300
Secondary Identifier:  ? PAC:30560404
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G179300 0.5kb upstream 0.5kb upstream 3141 true Chr16: 33992392-33995532 Glycine max
Glyma.16G179300 0.5kb upstream 0.5kb upstream 500 false Chr16: 33992392-33992891 Glycine max
Glyma.16G179300 0.5kb downstream 0.5kb downstream 3141 true Chr16: 33992892-33996032 Glycine max
Glyma.16G179300 0.5kb downstream 0.5kb downstream 500 false Chr16: 33995533-33996032 Glycine max
Glyma.16G179300 1.0kb upstream 1.0kb upstream 3641 true Chr16: 33991892-33995532 Glycine max
Glyma.16G179300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 33991892-33992891 Glycine max
Glyma.16G179300 1.0kb downstream 1.0kb downstream 3641 true Chr16: 33992892-33996532 Glycine max
Glyma.16G179300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 33995533-33996532 Glycine max
Glyma.16G179300 2.0kb upstream 2.0kb upstream 4641 true Chr16: 33990892-33995532 Glycine max
Glyma.16G179300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 33990892-33992891 Glycine max
Glyma.16G179300 2.0kb downstream 2.0kb downstream 4641 true Chr16: 33992892-33997532 Glycine max
Glyma.16G179300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 33995533-33997532 Glycine max
Glyma.16G179300 5.0kb upstream 5.0kb upstream 7641 true Chr16: 33987892-33995532 Glycine max
Glyma.16G179300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 33987892-33992891 Glycine max
Glyma.16G179300 5.0kb downstream 5.0kb downstream 7641 true Chr16: 33992892-34000532 Glycine max
Glyma.16G179300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 33995533-34000532 Glycine max
Glyma.16G179300 10.0kb upstream 10.0kb upstream 12641 true Chr16: 33982892-33995532 Glycine max
Glyma.16G179300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 33982892-33992891 Glycine max
Glyma.16G179300 10.0kb downstream 10.0kb downstream 12641 true Chr16: 33992892-34005532 Glycine max
Glyma.16G179300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 33995533-34005532 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313514 5265 Fabidae View MSA
124064876 5270 Rosid View MSA
123742190 5271 Pentapetalae View MSA
122791015 5272 Eudicot View MSA
122047689 5273 Angiosperm View MSA
121310779 5274 Embryophyte View MSA
123348183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.1571 0.0 136.504 High  
cufflinks 18.5704 0.0 103.838    
cufflinks 20.0776 0.0 100.072    
cufflinks 18.8948 0.0 106.749    
cufflinks 12.9601 0.0 65.1677   Low
cufflinks 24.6358 0.0 122.117 High  
cufflinks 36.2715 0.0 182.716 High High
cufflinks 24.8295 0.0 123.464 High  
cufflinks 13.3327 0.0 68.7666   Low
cufflinks 1.341        
cufflinks 1.178        
cufflinks 1.113        
cufflinks 0.777        
cufflinks 0.799        
cufflinks 0.607       Low
cufflinks 1.628       High
cufflinks 0.546       Low
cufflinks 1.689       High
cufflinks 1.034        
cufflinks 1.51        
cufflinks 0.655       Low
cufflinks 1.598       High
cufflinks 1.493        
cufflinks 1.333        
cufflinks 1.467        
cufflinks 0.496       Low

0 Strain