Gene : Glyma.17G002100 G. max Wm82.a2.v1
Defline:  (1 of 13) KOG4249 - Uncharacterized conserved protein Genomic Order:  21
Name:  ? Glyma.17G002100 Secondary Identifier:  ? PAC:30479495
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G002100 0.5kb upstream 0.5kb upstream 4636   true Chr17: 244592-249227 Glycine max
Glyma.17G002100 0.5kb upstream 0.5kb upstream 500   false Chr17: 244592-245091 Glycine max
Glyma.17G002100 0.5kb downstream 0.5kb downstream 4636   true Chr17: 245092-249727 Glycine max
Glyma.17G002100 0.5kb downstream 0.5kb downstream 500   false Chr17: 249228-249727 Glycine max
Glyma.17G002100 1.0kb upstream 1.0kb upstream 5136   true Chr17: 244092-249227 Glycine max
Glyma.17G002100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 244092-245091 Glycine max
Glyma.17G002100 1.0kb downstream 1.0kb downstream 5136   true Chr17: 245092-250227 Glycine max
Glyma.17G002100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 249228-250227 Glycine max
Glyma.17G002100 2.0kb upstream 2.0kb upstream 6136   true Chr17: 243092-249227 Glycine max
Glyma.17G002100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 243092-245091 Glycine max
Glyma.17G002100 2.0kb downstream 2.0kb downstream 6136   true Chr17: 245092-251227 Glycine max
Glyma.17G002100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 249228-251227 Glycine max
Glyma.17G002100 5.0kb upstream 5.0kb upstream 9136   true Chr17: 240092-249227 Glycine max
Glyma.17G002100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 240092-245091 Glycine max
Glyma.17G002100 5.0kb downstream 5.0kb downstream 9136   true Chr17: 245092-254227 Glycine max
Glyma.17G002100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 249228-254227 Glycine max
Glyma.17G002100 10.0kb upstream 10.0kb upstream 14136   true Chr17: 235092-249227 Glycine max
Glyma.17G002100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 235092-245091 Glycine max
Glyma.17G002100 10.0kb downstream 10.0kb downstream 14136   true Chr17: 245092-259227 Glycine max
Glyma.17G002100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 249228-259227 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307461 5265 Fabidae View MSA
124064766 5270 Rosid View MSA
123744399 5271 Pentapetalae View MSA
122790048 5272 Eudicot View MSA
122042067 5273 Angiosperm View MSA
121346127 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.39551 0.0 20.2436    
cufflinks 8.20919 0.0 22.3099    
cufflinks 6.23627 0.0 17.2937    
cufflinks 10.4873 0.0 28.1681    
cufflinks 8.92022 0.0 24.1196    
cufflinks 6.29789 0.0 17.4454    
cufflinks 14.2095 0.0 37.9168   High
cufflinks 4.40491 0.0 12.674   Low
cufflinks 4.7147 0.0 13.4439   Low
cufflinks 4.504        
cufflinks 2.94        
cufflinks 3.764        
cufflinks 6.144        
cufflinks 8.966     High  
cufflinks 2.279       Low
cufflinks 9.092     High High
cufflinks 1.604       Low
cufflinks 7.025        
cufflinks 6.209        
cufflinks 9.856     High High
cufflinks 2.263       Low
cufflinks 8.259     High  
cufflinks 8.514     High  
cufflinks 3.444        
cufflinks 10.288     High High
cufflinks 3.75        

0 Strain