Gene : Glyma.17G002400 G. max Wm82.a2.v1
Defline:  (1 of 1) 2.7.7.60 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / MEP cytidylyltransferase Genomic Order:  24
Name:  ? Glyma.17G002400 Secondary Identifier:  ? PAC:30481686
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7560 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G002400 0.5kb upstream 0.5kb upstream 5352   true Chr17: 274016-279367 Glycine max
Glyma.17G002400 0.5kb upstream 0.5kb upstream 500   false Chr17: 274016-274515 Glycine max
Glyma.17G002400 0.5kb downstream 0.5kb downstream 5352   true Chr17: 274516-279867 Glycine max
Glyma.17G002400 0.5kb downstream 0.5kb downstream 500   false Chr17: 279368-279867 Glycine max
Glyma.17G002400 1.0kb upstream 1.0kb upstream 5852   true Chr17: 273516-279367 Glycine max
Glyma.17G002400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 273516-274515 Glycine max
Glyma.17G002400 1.0kb downstream 1.0kb downstream 5852   true Chr17: 274516-280367 Glycine max
Glyma.17G002400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 279368-280367 Glycine max
Glyma.17G002400 2.0kb upstream 2.0kb upstream 6852   true Chr17: 272516-279367 Glycine max
Glyma.17G002400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 272516-274515 Glycine max
Glyma.17G002400 2.0kb downstream 2.0kb downstream 6852   true Chr17: 274516-281367 Glycine max
Glyma.17G002400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 279368-281367 Glycine max
Glyma.17G002400 5.0kb upstream 5.0kb upstream 9852   true Chr17: 269516-279367 Glycine max
Glyma.17G002400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 269516-274515 Glycine max
Glyma.17G002400 5.0kb downstream 5.0kb downstream 9852   true Chr17: 274516-284367 Glycine max
Glyma.17G002400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 279368-284367 Glycine max
Glyma.17G002400 10.0kb upstream 10.0kb upstream 14852   true Chr17: 264516-279367 Glycine max
Glyma.17G002400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 264516-274515 Glycine max
Glyma.17G002400 10.0kb downstream 10.0kb downstream 14852   true Chr17: 274516-289367 Glycine max
Glyma.17G002400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 279368-289367 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299722 5265 Fabidae View MSA
124060576 5270 Rosid View MSA
123739794 5271 Pentapetalae View MSA
122786593 5272 Eudicot View MSA
122044265 5273 Angiosperm View MSA
121344499 5274 Embryophyte View MSA
123424809 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.492 0.0 486.734 High High
cufflinks 52.06 0.0 226.22 High  
cufflinks 31.6414 0.0 136.647 High Low
cufflinks 40.564 0.0 173.105 High  
cufflinks 47.1085 0.0 202.276 High  
cufflinks 45.9512 0.0 196.493 High  
cufflinks 40.3358 0.0 166.222 High  
cufflinks 50.9154 0.0 226.691 High  
cufflinks 46.5843 0.0 189.796 High  
cufflinks 3.027        
cufflinks 1.051       Low
cufflinks 2.519        
cufflinks 3.769        
cufflinks 4.063        
cufflinks 1.805        
cufflinks 4.509        
cufflinks 2.365        
cufflinks 2.872        
cufflinks 3.481        
cufflinks 4.483        
cufflinks 1.429       Low
cufflinks 4.493        
cufflinks 4.456        
cufflinks 1.381       Low
cufflinks 4.699       High
cufflinks 2.0        

0 Strain