Gene : Glyma.17G004300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11880:SF10 - 40S RIBOSOMAL PROTEIN S15-6 Genomic Order:  43
Name:  ? Glyma.17G004300 Secondary Identifier:  ? PAC:30482515
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G004300 0.5kb upstream 0.5kb upstream 1477   true Chr17: 428357-429833 Glycine max
Glyma.17G004300 0.5kb upstream 0.5kb upstream 500   false Chr17: 428357-428856 Glycine max
Glyma.17G004300 0.5kb downstream 0.5kb downstream 1477   true Chr17: 428857-430333 Glycine max
Glyma.17G004300 0.5kb downstream 0.5kb downstream 500   false Chr17: 429834-430333 Glycine max
Glyma.17G004300 1.0kb upstream 1.0kb upstream 1977   true Chr17: 427857-429833 Glycine max
Glyma.17G004300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 427857-428856 Glycine max
Glyma.17G004300 1.0kb downstream 1.0kb downstream 1977   true Chr17: 428857-430833 Glycine max
Glyma.17G004300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 429834-430833 Glycine max
Glyma.17G004300 2.0kb upstream 2.0kb upstream 2977   true Chr17: 426857-429833 Glycine max
Glyma.17G004300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 426857-428856 Glycine max
Glyma.17G004300 2.0kb downstream 2.0kb downstream 2977   true Chr17: 428857-431833 Glycine max
Glyma.17G004300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 429834-431833 Glycine max
Glyma.17G004300 5.0kb upstream 5.0kb upstream 5977   true Chr17: 423857-429833 Glycine max
Glyma.17G004300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 423857-428856 Glycine max
Glyma.17G004300 5.0kb downstream 5.0kb downstream 5977   true Chr17: 428857-434833 Glycine max
Glyma.17G004300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 429834-434833 Glycine max
Glyma.17G004300 10.0kb upstream 10.0kb upstream 10977   true Chr17: 418857-429833 Glycine max
Glyma.17G004300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 418857-428856 Glycine max
Glyma.17G004300 10.0kb downstream 10.0kb downstream 10977   true Chr17: 428857-439833 Glycine max
Glyma.17G004300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 429834-439833 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312187 5265 Fabidae View MSA
124072924 5270 Rosid View MSA
123737007 5271 Pentapetalae View MSA
122786475 5272 Eudicot View MSA
122041885 5273 Angiosperm View MSA
121349053 5274 Embryophyte View MSA
123425446 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.2836 0.0 207.507 High  
cufflinks 91.8749 0.0 342.347 High  
cufflinks 35.2921 0.0 120.952 High Low
cufflinks 38.4812 0.0 131.435 High Low
cufflinks 141.383 0.0 517.509 High High
cufflinks 127.787 0.0 535.131 High High
cufflinks 70.4101 0.0 252.296 High  
cufflinks 72.6119 0.0 260.849 High  
cufflinks 86.9798 0.0 322.182 High  
cufflinks 27.602     High  
cufflinks 9.959     High Low
cufflinks 17.249     High  
cufflinks 78.605     High High
cufflinks 110.628     High High
cufflinks 8.562     High Low
cufflinks 30.115     High  
cufflinks 20.713     High  
cufflinks 18.267     High  
cufflinks 36.109     High  
cufflinks 17.71     High  
cufflinks 16.02     High  
cufflinks 20.186     High  
cufflinks 37.248     High  
cufflinks 12.064     High Low
cufflinks 23.311     High  
cufflinks 22.665     High  

0 Strain