Gene : Glyma.17G004700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10774//PTHR10774:SF90 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  47
Name:  ? Glyma.17G004700 Secondary Identifier:  ? PAC:30479187
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G004700 0.5kb upstream 0.5kb upstream 7096   true Chr17: 459141-466236 Glycine max
Glyma.17G004700 0.5kb upstream 0.5kb upstream 500   false Chr17: 465737-466236 Glycine max
Glyma.17G004700 0.5kb downstream 0.5kb downstream 7096   true Chr17: 458641-465736 Glycine max
Glyma.17G004700 0.5kb downstream 0.5kb downstream 500   false Chr17: 458641-459140 Glycine max
Glyma.17G004700 1.0kb upstream 1.0kb upstream 7596   true Chr17: 459141-466736 Glycine max
Glyma.17G004700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 465737-466736 Glycine max
Glyma.17G004700 1.0kb downstream 1.0kb downstream 7596   true Chr17: 458141-465736 Glycine max
Glyma.17G004700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 458141-459140 Glycine max
Glyma.17G004700 2.0kb upstream 2.0kb upstream 8596   true Chr17: 459141-467736 Glycine max
Glyma.17G004700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 465737-467736 Glycine max
Glyma.17G004700 2.0kb downstream 2.0kb downstream 8596   true Chr17: 457141-465736 Glycine max
Glyma.17G004700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 457141-459140 Glycine max
Glyma.17G004700 5.0kb upstream 5.0kb upstream 11596   true Chr17: 459141-470736 Glycine max
Glyma.17G004700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 465737-470736 Glycine max
Glyma.17G004700 5.0kb downstream 5.0kb downstream 11596   true Chr17: 454141-465736 Glycine max
Glyma.17G004700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 454141-459140 Glycine max
Glyma.17G004700 10.0kb upstream 10.0kb upstream 16596   true Chr17: 459141-475736 Glycine max
Glyma.17G004700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 465737-475736 Glycine max
Glyma.17G004700 10.0kb downstream 10.0kb downstream 16596   true Chr17: 449141-465736 Glycine max
Glyma.17G004700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 449141-459140 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656013 5273 Angiosperm View MSA
122297072 5265 Fabidae View MSA
124035893 5270 Rosid View MSA
123609342 5271 Pentapetalae View MSA
122643991 5272 Eudicot View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.36759 0.0 5.85357   High
cufflinks 0.280962 0.0 1.71429    
cufflinks 2.49842 0.0 8.79171   High
cufflinks 0.281956 0.0 1.30377    
cufflinks 0.234462 0.0 1.122    
cufflinks 0.393496 0.0 2.31141    
cufflinks 1.41104 0.0 5.96953   High
cufflinks 0.20865 0.0 1.35217 Low  
cufflinks 0.327079 0.0 1.47057    
cufflinks 0.075     Low Low
cufflinks 0.23        
cufflinks 0.299        
cufflinks 0.182        
cufflinks 0.083       Low
cufflinks 0.056       Low
cufflinks 0.276        
cufflinks 0.123        
cufflinks 0.57       High
cufflinks 0.18        
cufflinks 0.412       High
cufflinks 0.201        
cufflinks 0.392        
cufflinks 0.244        
cufflinks 0.388        
cufflinks 0.333        
cufflinks 0.058     Low Low

0 Strain