Gene : Glyma.17G005300 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  53
Name:  ? Glyma.17G005300 Secondary Identifier:  ? PAC:30482355
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ILEUDEG-PWY Glycine max pathologic  
Gmax PWY-5910 Glycine max pathologic  
Gmax PWY-922 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G005300 0.5kb upstream 0.5kb upstream 5412   true Chr17: 492754-498165 Glycine max
Glyma.17G005300 0.5kb upstream 0.5kb upstream 500   false Chr17: 497666-498165 Glycine max
Glyma.17G005300 0.5kb downstream 0.5kb downstream 5412   true Chr17: 492254-497665 Glycine max
Glyma.17G005300 0.5kb downstream 0.5kb downstream 500   false Chr17: 492254-492753 Glycine max
Glyma.17G005300 1.0kb upstream 1.0kb upstream 5912   true Chr17: 492754-498665 Glycine max
Glyma.17G005300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 497666-498665 Glycine max
Glyma.17G005300 1.0kb downstream 1.0kb downstream 5912   true Chr17: 491754-497665 Glycine max
Glyma.17G005300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 491754-492753 Glycine max
Glyma.17G005300 2.0kb upstream 2.0kb upstream 6912   true Chr17: 492754-499665 Glycine max
Glyma.17G005300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 497666-499665 Glycine max
Glyma.17G005300 2.0kb downstream 2.0kb downstream 6912   true Chr17: 490754-497665 Glycine max
Glyma.17G005300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 490754-492753 Glycine max
Glyma.17G005300 5.0kb upstream 5.0kb upstream 9912   true Chr17: 492754-502665 Glycine max
Glyma.17G005300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 497666-502665 Glycine max
Glyma.17G005300 5.0kb downstream 5.0kb downstream 9912   true Chr17: 487754-497665 Glycine max
Glyma.17G005300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 487754-492753 Glycine max
Glyma.17G005300 10.0kb upstream 10.0kb upstream 14912   true Chr17: 492754-507665 Glycine max
Glyma.17G005300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 497666-507665 Glycine max
Glyma.17G005300 10.0kb downstream 10.0kb downstream 14912   true Chr17: 482754-497665 Glycine max
Glyma.17G005300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 482754-492753 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301952 5265 Fabidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.4719 0.0 92.97 High  
cufflinks 14.3477 0.0 47.8383    
cufflinks 49.038 0.0 185.885 High High
cufflinks 20.0285 0.0 66.2851 High  
cufflinks 17.1736 0.0 56.7576    
cufflinks 10.2388 0.0 34.9283   Low
cufflinks 18.5526 0.0 61.3053    
cufflinks 12.9122 0.0 43.1001    
cufflinks 13.2333 0.0 44.1139    
cufflinks 1.764       Low
cufflinks 8.277     High High
cufflinks 6.797       High
cufflinks 1.81        
cufflinks 2.308        
cufflinks 3.507        
cufflinks 1.991        
cufflinks 2.302        
cufflinks 3.432        
cufflinks 2.974        
cufflinks 2.969        
cufflinks 3.495        
cufflinks 2.213        
cufflinks 1.305       Low
cufflinks 7.678     High High
cufflinks 2.378        
cufflinks 3.046        

0 Strain