Gene : Glyma.17G005600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11064:SF20 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6-RELATED Genomic Order:  56
Name:  ? Glyma.17G005600 Secondary Identifier:  ? PAC:30479216
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G005600 0.5kb upstream 0.5kb upstream 2881   true Chr17: 528335-531215 Glycine max
Glyma.17G005600 0.5kb upstream 0.5kb upstream 500   false Chr17: 530716-531215 Glycine max
Glyma.17G005600 0.5kb downstream 0.5kb downstream 2881   true Chr17: 527835-530715 Glycine max
Glyma.17G005600 0.5kb downstream 0.5kb downstream 500   false Chr17: 527835-528334 Glycine max
Glyma.17G005600 1.0kb upstream 1.0kb upstream 3381   true Chr17: 528335-531715 Glycine max
Glyma.17G005600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 530716-531715 Glycine max
Glyma.17G005600 1.0kb downstream 1.0kb downstream 3381   true Chr17: 527335-530715 Glycine max
Glyma.17G005600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 527335-528334 Glycine max
Glyma.17G005600 2.0kb upstream 2.0kb upstream 4381   true Chr17: 528335-532715 Glycine max
Glyma.17G005600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 530716-532715 Glycine max
Glyma.17G005600 2.0kb downstream 2.0kb downstream 4381   true Chr17: 526335-530715 Glycine max
Glyma.17G005600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 526335-528334 Glycine max
Glyma.17G005600 5.0kb upstream 5.0kb upstream 7381   true Chr17: 528335-535715 Glycine max
Glyma.17G005600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 530716-535715 Glycine max
Glyma.17G005600 5.0kb downstream 5.0kb downstream 7381   true Chr17: 523335-530715 Glycine max
Glyma.17G005600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 523335-528334 Glycine max
Glyma.17G005600 10.0kb upstream 10.0kb upstream 12381   true Chr17: 528335-540715 Glycine max
Glyma.17G005600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 530716-540715 Glycine max
Glyma.17G005600 10.0kb downstream 10.0kb downstream 12381   true Chr17: 518335-530715 Glycine max
Glyma.17G005600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 518335-528334 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309480 5265 Fabidae View MSA
124066588 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0678749 0.0 0.280944 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.283088 0.0 1.10486    
cufflinks 19.4826 0.0 52.7656    
cufflinks 0.0183871 0.0 0.0844737 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 142.834 0.0 430.16 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain