Gene : Glyma.16G220300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31451:SF17 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 6 Genomic Order:  2203
Name:  ? Glyma.16G220300 Secondary Identifier:  ? PAC:30559537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G220300 0.5kb upstream 0.5kb upstream 5568 true Chr16: 37739581-37745148 Glycine max
Glyma.16G220300 0.5kb upstream 0.5kb upstream 500 false Chr16: 37744649-37745148 Glycine max
Glyma.16G220300 0.5kb downstream 0.5kb downstream 5568 true Chr16: 37739081-37744648 Glycine max
Glyma.16G220300 0.5kb downstream 0.5kb downstream 500 false Chr16: 37739081-37739580 Glycine max
Glyma.16G220300 1.0kb upstream 1.0kb upstream 6068 true Chr16: 37739581-37745648 Glycine max
Glyma.16G220300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37744649-37745648 Glycine max
Glyma.16G220300 1.0kb downstream 1.0kb downstream 6068 true Chr16: 37738581-37744648 Glycine max
Glyma.16G220300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37738581-37739580 Glycine max
Glyma.16G220300 2.0kb upstream 2.0kb upstream 7068 true Chr16: 37739581-37746648 Glycine max
Glyma.16G220300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37744649-37746648 Glycine max
Glyma.16G220300 2.0kb downstream 2.0kb downstream 7068 true Chr16: 37737581-37744648 Glycine max
Glyma.16G220300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37737581-37739580 Glycine max
Glyma.16G220300 5.0kb upstream 5.0kb upstream 10068 true Chr16: 37739581-37749648 Glycine max
Glyma.16G220300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37744649-37749648 Glycine max
Glyma.16G220300 5.0kb downstream 5.0kb downstream 10068 true Chr16: 37734581-37744648 Glycine max
Glyma.16G220300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37734581-37739580 Glycine max
Glyma.16G220300 10.0kb upstream 10.0kb upstream 15068 true Chr16: 37739581-37754648 Glycine max
Glyma.16G220300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37744649-37754648 Glycine max
Glyma.16G220300 10.0kb downstream 10.0kb downstream 15068 true Chr16: 37729581-37744648 Glycine max
Glyma.16G220300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37729581-37739580 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247304 5265 Fabidae Singleton cluster - no MSA
124070287 5270 Rosid View MSA
123736857 5271 Pentapetalae View MSA
122790316 5272 Eudicot View MSA
122051044 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.96126 0.0 28.8864    
cufflinks 4.46742 0.0 25.7587    
cufflinks 1.59307 0.0 7.94061   Low
cufflinks 6.63573 0.0 29.4218    
cufflinks 2.29413 0.0 13.0887   Low
cufflinks 13.3397 0.0 52.486   High
cufflinks 3.46246 0.0 20.2011    
cufflinks 5.13302 0.0 22.2645    
cufflinks 4.17079 0.0 14.7828    
cufflinks 1.492       High
cufflinks 0.461        
cufflinks 0.217        
cufflinks 1.078        
cufflinks 0.168       Low
cufflinks 0.021     Low Low
cufflinks 0.734        
cufflinks 0.856        
cufflinks 0.64        
cufflinks 0.565        
cufflinks 0.742        
cufflinks 0.694        
cufflinks 0.84        
cufflinks 0.49        
cufflinks 0.54        
cufflinks 0.792        
cufflinks 0.942        

0 Strain