Gene : Glyma.16G222300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23324//PTHR23324:SF45 - SEC14 RELATED PROTEIN Genomic Order:  2223
Name:  ? Glyma.16G222300 Secondary Identifier:  ? PAC:30561666
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G222300 0.5kb upstream 0.5kb upstream 11893 true Chr16: 37862856-37874748 Glycine max
Glyma.16G222300 0.5kb upstream 0.5kb upstream 500 false Chr16: 37862856-37863355 Glycine max
Glyma.16G222300 0.5kb downstream 0.5kb downstream 11893 true Chr16: 37863356-37875248 Glycine max
Glyma.16G222300 0.5kb downstream 0.5kb downstream 500 false Chr16: 37874749-37875248 Glycine max
Glyma.16G222300 1.0kb upstream 1.0kb upstream 12393 true Chr16: 37862356-37874748 Glycine max
Glyma.16G222300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37862356-37863355 Glycine max
Glyma.16G222300 1.0kb downstream 1.0kb downstream 12393 true Chr16: 37863356-37875748 Glycine max
Glyma.16G222300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37874749-37875748 Glycine max
Glyma.16G222300 2.0kb upstream 2.0kb upstream 13393 true Chr16: 37861356-37874748 Glycine max
Glyma.16G222300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37861356-37863355 Glycine max
Glyma.16G222300 2.0kb downstream 2.0kb downstream 13393 true Chr16: 37863356-37876748 Glycine max
Glyma.16G222300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37874749-37876748 Glycine max
Glyma.16G222300 5.0kb upstream 5.0kb upstream 16393 true Chr16: 37858356-37874748 Glycine max
Glyma.16G222300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37858356-37863355 Glycine max
Glyma.16G222300 5.0kb downstream 5.0kb downstream 16393 true Chr16: 37863356-37879748 Glycine max
Glyma.16G222300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37874749-37879748 Glycine max
Glyma.16G222300 10.0kb upstream 10.0kb upstream 21393 true Chr16: 37853356-37874748 Glycine max
Glyma.16G222300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37853356-37863355 Glycine max
Glyma.16G222300 10.0kb downstream 10.0kb downstream 21393 true Chr16: 37863356-37884748 Glycine max
Glyma.16G222300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37874749-37884748 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026525 5273 Angiosperm View MSA
122300278 5265 Fabidae View MSA
124063950 5270 Rosid View MSA
123740798 5271 Pentapetalae View MSA
122786115 5272 Eudicot View MSA
121346667 5274 Embryophyte View MSA
123426655 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.915 0.0 63.0935    
cufflinks 8.82129 0.0 32.4967   Low
cufflinks 23.2657 0.0 89.0785 High  
cufflinks 16.7144 0.0 58.5665    
cufflinks 16.398 0.0 55.2888    
cufflinks 23.4898 0.0 79.5958 High High
cufflinks 7.80225 0.0 25.5715   Low
cufflinks 17.7972 0.0 59.9785    
cufflinks 18.3965 0.0 62.8523    
cufflinks 0.642        
cufflinks 1.343       High
cufflinks 0.649        
cufflinks 0.895        
cufflinks 0.668        
cufflinks 1.254       High
cufflinks 0.471        
cufflinks 0.731        
cufflinks 0.51        
cufflinks 0.426       Low
cufflinks 0.489        
cufflinks 1.227       High
cufflinks 0.508        
cufflinks 0.352       Low
cufflinks 1.444       High
cufflinks 0.437       Low
cufflinks 1.013        

0 Strain