Gene : Glyma.17G000400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12882 - SUPPRESSOR OF TY 4 Genomic Order:  4
Name:  ? Glyma.17G000400 Secondary Identifier:  ? PAC:30481939
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G000400 0.5kb upstream 0.5kb upstream 6151   true Chr17: 26659-32809 Glycine max
Glyma.17G000400 0.5kb upstream 0.5kb upstream 500   false Chr17: 26659-27158 Glycine max
Glyma.17G000400 0.5kb downstream 0.5kb downstream 6151   true Chr17: 27159-33309 Glycine max
Glyma.17G000400 0.5kb downstream 0.5kb downstream 500   false Chr17: 32810-33309 Glycine max
Glyma.17G000400 1.0kb upstream 1.0kb upstream 6651   true Chr17: 26159-32809 Glycine max
Glyma.17G000400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 26159-27158 Glycine max
Glyma.17G000400 1.0kb downstream 1.0kb downstream 6651   true Chr17: 27159-33809 Glycine max
Glyma.17G000400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 32810-33809 Glycine max
Glyma.17G000400 2.0kb upstream 2.0kb upstream 7651   true Chr17: 25159-32809 Glycine max
Glyma.17G000400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 25159-27158 Glycine max
Glyma.17G000400 2.0kb downstream 2.0kb downstream 7651   true Chr17: 27159-34809 Glycine max
Glyma.17G000400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 32810-34809 Glycine max
Glyma.17G000400 5.0kb upstream 5.0kb upstream 10651   true Chr17: 22159-32809 Glycine max
Glyma.17G000400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 22159-27158 Glycine max
Glyma.17G000400 5.0kb downstream 5.0kb downstream 10651   true Chr17: 27159-37809 Glycine max
Glyma.17G000400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 32810-37809 Glycine max
Glyma.17G000400 10.0kb upstream 10.0kb upstream 15651   true Chr17: 17159-32809 Glycine max
Glyma.17G000400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 17159-27158 Glycine max
Glyma.17G000400 10.0kb downstream 10.0kb downstream 15651   true Chr17: 27159-42809 Glycine max
Glyma.17G000400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 32810-42809 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302293 5265 Fabidae View MSA
124065394 5270 Rosid View MSA
123740657 5271 Pentapetalae View MSA
122786663 5272 Eudicot View MSA
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.6165 0.0 95.2553 High Low
cufflinks 41.884 0.0 149.866 High High
cufflinks 20.3984 0.0 78.2154 High Low
cufflinks 33.2616 0.0 120.553 High  
cufflinks 34.2587 0.0 123.483 High  
cufflinks 41.1011 0.0 147.723 High High
cufflinks 36.866 0.0 132.554 High  
cufflinks 29.2585 0.0 106.623 High  
cufflinks 34.5829 0.0 124.903 High  
cufflinks 1.456        
cufflinks 0.885       Low
cufflinks 1.449        
cufflinks 1.897       High
cufflinks 2.206       High
cufflinks 0.85       Low
cufflinks 1.631        
cufflinks 0.922       Low
cufflinks 1.727        
cufflinks 2.104       High
cufflinks 1.487        
cufflinks 1.117        
cufflinks 1.546        
cufflinks 1.764        
cufflinks 1.16        
cufflinks 1.485        
cufflinks 1.205        

0 Strain