Gene : Glyma.16G213400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20932//PTHR20932:SF11 - LOC443603 PROTEIN-RELATED Genomic Order:  2134
Name:  ? Glyma.16G213400 Secondary Identifier:  ? PAC:30558889
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G213400 0.5kb upstream 0.5kb upstream 3954 true Chr16: 37145525-37149478 Glycine max
Glyma.16G213400 0.5kb upstream 0.5kb upstream 500 false Chr16: 37148979-37149478 Glycine max
Glyma.16G213400 0.5kb downstream 0.5kb downstream 3954 true Chr16: 37145025-37148978 Glycine max
Glyma.16G213400 0.5kb downstream 0.5kb downstream 500 false Chr16: 37145025-37145524 Glycine max
Glyma.16G213400 1.0kb upstream 1.0kb upstream 4454 true Chr16: 37145525-37149978 Glycine max
Glyma.16G213400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37148979-37149978 Glycine max
Glyma.16G213400 1.0kb downstream 1.0kb downstream 4454 true Chr16: 37144525-37148978 Glycine max
Glyma.16G213400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37144525-37145524 Glycine max
Glyma.16G213400 2.0kb upstream 2.0kb upstream 5454 true Chr16: 37145525-37150978 Glycine max
Glyma.16G213400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37148979-37150978 Glycine max
Glyma.16G213400 2.0kb downstream 2.0kb downstream 5454 true Chr16: 37143525-37148978 Glycine max
Glyma.16G213400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37143525-37145524 Glycine max
Glyma.16G213400 5.0kb upstream 5.0kb upstream 8454 true Chr16: 37145525-37153978 Glycine max
Glyma.16G213400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37148979-37153978 Glycine max
Glyma.16G213400 5.0kb downstream 5.0kb downstream 8454 true Chr16: 37140525-37148978 Glycine max
Glyma.16G213400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37140525-37145524 Glycine max
Glyma.16G213400 10.0kb upstream 10.0kb upstream 13454 true Chr16: 37145525-37158978 Glycine max
Glyma.16G213400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37148979-37158978 Glycine max
Glyma.16G213400 10.0kb downstream 10.0kb downstream 13454 true Chr16: 37135525-37148978 Glycine max
Glyma.16G213400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37135525-37145524 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040928 5273 Angiosperm View MSA
122308441 5265 Fabidae View MSA
124070010 5270 Rosid View MSA
123744886 5271 Pentapetalae View MSA
122793061 5272 Eudicot View MSA
121350889 5274 Embryophyte View MSA
123426344 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.92026 0.0 27.6565    
cufflinks 6.04849 0.0 20.1456    
cufflinks 7.57163 0.0 30.9516    
cufflinks 9.63674 0.0 35.3639    
cufflinks 6.55713 0.0 26.2078    
cufflinks 25.6552 0.0 78.246 High High
cufflinks 5.40685 0.0 22.4285   Low
cufflinks 8.45667 0.0 26.4494    
cufflinks 7.89775 0.0 25.0828    
cufflinks 6.649       High
cufflinks 2.388        
cufflinks 2.206        
cufflinks 2.752        
cufflinks 1.356       Low
cufflinks 10.974     High High
cufflinks 2.214        
cufflinks 6.212     High High
cufflinks 2.738        
cufflinks 1.894        
cufflinks 1.963        
cufflinks 2.937        
cufflinks 2.622        
cufflinks 3.553        
cufflinks 1.993        
cufflinks 1.863        
cufflinks 4.313        

0 Strain