Gene : Glyma.16G215500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21681 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 1 Genomic Order:  2155
Name:  ? Glyma.16G215500 Secondary Identifier:  ? PAC:30559158
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G215500 0.5kb upstream 0.5kb upstream 6128 true Chr16: 37284266-37290393 Glycine max
Glyma.16G215500 0.5kb upstream 0.5kb upstream 500 false Chr16: 37284266-37284765 Glycine max
Glyma.16G215500 0.5kb downstream 0.5kb downstream 6128 true Chr16: 37284766-37290893 Glycine max
Glyma.16G215500 0.5kb downstream 0.5kb downstream 500 false Chr16: 37290394-37290893 Glycine max
Glyma.16G215500 1.0kb upstream 1.0kb upstream 6628 true Chr16: 37283766-37290393 Glycine max
Glyma.16G215500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37283766-37284765 Glycine max
Glyma.16G215500 1.0kb downstream 1.0kb downstream 6628 true Chr16: 37284766-37291393 Glycine max
Glyma.16G215500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37290394-37291393 Glycine max
Glyma.16G215500 2.0kb upstream 2.0kb upstream 7628 true Chr16: 37282766-37290393 Glycine max
Glyma.16G215500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37282766-37284765 Glycine max
Glyma.16G215500 2.0kb downstream 2.0kb downstream 7628 true Chr16: 37284766-37292393 Glycine max
Glyma.16G215500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37290394-37292393 Glycine max
Glyma.16G215500 5.0kb upstream 5.0kb upstream 10628 true Chr16: 37279766-37290393 Glycine max
Glyma.16G215500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37279766-37284765 Glycine max
Glyma.16G215500 5.0kb downstream 5.0kb downstream 10628 true Chr16: 37284766-37295393 Glycine max
Glyma.16G215500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37290394-37295393 Glycine max
Glyma.16G215500 10.0kb upstream 10.0kb upstream 15628 true Chr16: 37274766-37290393 Glycine max
Glyma.16G215500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37274766-37284765 Glycine max
Glyma.16G215500 10.0kb downstream 10.0kb downstream 15628 true Chr16: 37284766-37300393 Glycine max
Glyma.16G215500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37290394-37300393 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305517 5265 Fabidae View MSA
124062872 5270 Rosid View MSA
123745342 5271 Pentapetalae View MSA
122795526 5272 Eudicot View MSA
122043857 5273 Angiosperm View MSA
121344885 5274 Embryophyte View MSA
123424883 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6709 0.0 47.2472    
cufflinks 15.3876 0.0 41.2782   Low
cufflinks 13.4671 0.0 36.293   Low
cufflinks 16.6379 0.0 44.5175    
cufflinks 25.7768 0.0 68.8711 High High
cufflinks 28.3442 0.0 75.9206 High High
cufflinks 21.7582 0.0 58.0487 High  
cufflinks 23.0302 0.0 61.4619 High  
cufflinks 21.6795 0.0 57.8387 High  
cufflinks 5.241        
cufflinks 4.429        
cufflinks 3.912        
cufflinks 7.803     High High
cufflinks 9.668     High High
cufflinks 3.725        
cufflinks 3.423       Low
cufflinks 5.715        
cufflinks 4.089        
cufflinks 4.136        
cufflinks 3.558        
cufflinks 4.995        
cufflinks 3.636        
cufflinks 5.155        
cufflinks 4.545        
cufflinks 3.148       Low
cufflinks 5.298        

0 Strain