Gene : Glyma.16G217100 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR24015:SF419 - NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2171
Name:  ? Glyma.16G217100 Secondary Identifier:  ? PAC:30559052
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G217100 0.5kb upstream 0.5kb upstream 7834 true Chr16: 37400965-37408798 Glycine max
Glyma.16G217100 0.5kb upstream 0.5kb upstream 500 false Chr16: 37408299-37408798 Glycine max
Glyma.16G217100 0.5kb downstream 0.5kb downstream 7834 true Chr16: 37400465-37408298 Glycine max
Glyma.16G217100 0.5kb downstream 0.5kb downstream 500 false Chr16: 37400465-37400964 Glycine max
Glyma.16G217100 1.0kb upstream 1.0kb upstream 8334 true Chr16: 37400965-37409298 Glycine max
Glyma.16G217100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37408299-37409298 Glycine max
Glyma.16G217100 1.0kb downstream 1.0kb downstream 8334 true Chr16: 37399965-37408298 Glycine max
Glyma.16G217100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37399965-37400964 Glycine max
Glyma.16G217100 2.0kb upstream 2.0kb upstream 9334 true Chr16: 37400965-37410298 Glycine max
Glyma.16G217100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37408299-37410298 Glycine max
Glyma.16G217100 2.0kb downstream 2.0kb downstream 9334 true Chr16: 37398965-37408298 Glycine max
Glyma.16G217100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37398965-37400964 Glycine max
Glyma.16G217100 5.0kb upstream 5.0kb upstream 12334 true Chr16: 37400965-37413298 Glycine max
Glyma.16G217100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37408299-37413298 Glycine max
Glyma.16G217100 5.0kb downstream 5.0kb downstream 12334 true Chr16: 37395965-37408298 Glycine max
Glyma.16G217100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37395965-37400964 Glycine max
Glyma.16G217100 10.0kb upstream 10.0kb upstream 17334 true Chr16: 37400965-37418298 Glycine max
Glyma.16G217100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37408299-37418298 Glycine max
Glyma.16G217100 10.0kb downstream 10.0kb downstream 17334 true Chr16: 37390965-37408298 Glycine max
Glyma.16G217100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37390965-37400964 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309714 5265 Fabidae View MSA
124072504 5270 Rosid View MSA
123743110 5271 Pentapetalae View MSA
122789265 5272 Eudicot View MSA
122042337 5273 Angiosperm View MSA
121347291 5274 Embryophyte View MSA
123428374 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.468 0.0 81.0741   High
cufflinks 1.57264 0.0 10.5585   Low
cufflinks 25.4084 0.0 107.458 High High
cufflinks 3.01066 0.0 16.6658    
cufflinks 6.01807 0.0 27.5371    
cufflinks 6.172 0.0 31.3976    
cufflinks 5.62434 0.0 21.2663    
cufflinks 1.08368 0.0 6.65434   Low
cufflinks 5.50511 0.0 25.0961    
cufflinks 0.323        
cufflinks 2.01       High
cufflinks 1.742       High
cufflinks 1.409        
cufflinks 0.973        
cufflinks 0.653        
cufflinks 0.28       Low
cufflinks 0.727        
cufflinks 0.622        
cufflinks 0.295        
cufflinks 0.179       Low
cufflinks 2.301       High
cufflinks 0.327        
cufflinks 0.335        
cufflinks 2.411       High
cufflinks 0.231       Low
cufflinks 1.74       High

0 Strain