Gene : Glyma.16G217300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22891//PTHR22891:SF34 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C Genomic Order:  2173
Name:  ? Glyma.16G217300 Secondary Identifier:  ? PAC:30562113
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G217300 0.5kb upstream 0.5kb upstream 7835 true Chr16: 37420630-37428464 Glycine max
Glyma.16G217300 0.5kb upstream 0.5kb upstream 500 false Chr16: 37427965-37428464 Glycine max
Glyma.16G217300 0.5kb downstream 0.5kb downstream 7835 true Chr16: 37420130-37427964 Glycine max
Glyma.16G217300 0.5kb downstream 0.5kb downstream 500 false Chr16: 37420130-37420629 Glycine max
Glyma.16G217300 1.0kb upstream 1.0kb upstream 8335 true Chr16: 37420630-37428964 Glycine max
Glyma.16G217300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37427965-37428964 Glycine max
Glyma.16G217300 1.0kb downstream 1.0kb downstream 8335 true Chr16: 37419630-37427964 Glycine max
Glyma.16G217300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37419630-37420629 Glycine max
Glyma.16G217300 2.0kb upstream 2.0kb upstream 9335 true Chr16: 37420630-37429964 Glycine max
Glyma.16G217300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37427965-37429964 Glycine max
Glyma.16G217300 2.0kb downstream 2.0kb downstream 9335 true Chr16: 37418630-37427964 Glycine max
Glyma.16G217300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37418630-37420629 Glycine max
Glyma.16G217300 5.0kb upstream 5.0kb upstream 12335 true Chr16: 37420630-37432964 Glycine max
Glyma.16G217300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37427965-37432964 Glycine max
Glyma.16G217300 5.0kb downstream 5.0kb downstream 12335 true Chr16: 37415630-37427964 Glycine max
Glyma.16G217300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37415630-37420629 Glycine max
Glyma.16G217300 10.0kb upstream 10.0kb upstream 17335 true Chr16: 37420630-37437964 Glycine max
Glyma.16G217300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37427965-37437964 Glycine max
Glyma.16G217300 10.0kb downstream 10.0kb downstream 17335 true Chr16: 37410630-37427964 Glycine max
Glyma.16G217300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37410630-37420629 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301658 5265 Fabidae View MSA
124062634 5270 Rosid View MSA
123738566 5271 Pentapetalae View MSA
122790150 5272 Eudicot View MSA
122045279 5273 Angiosperm View MSA
121345149 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.00047 0.0 24.0573   Low
cufflinks 43.6903 0.0 137.439 High High
cufflinks 15.7575 0.0 43.3391    
cufflinks 27.001 0.0 78.8675 High  
cufflinks 28.1192 0.0 82.7298 High  
cufflinks 11.6736 0.0 31.4814   Low
cufflinks 29.9804 0.0 89.049 High  
cufflinks 34.8371 0.0 105.837 High  
cufflinks 27.0247 0.0 78.952 High  
cufflinks 24.26     High  
cufflinks 5.358       Low
cufflinks 15.706     High  
cufflinks 20.015     High  
cufflinks 19.877     High  
cufflinks 10.693     High  
cufflinks 21.412     High  
cufflinks 9.819     High  
cufflinks 22.527     High  
cufflinks 47.192     High High
cufflinks 16.571     High  
cufflinks 7.014     High Low
cufflinks 19.193     High  
cufflinks 20.265     High  
cufflinks 6.543     High Low
cufflinks 18.047     High  
cufflinks 10.097     High  

0 Strain