Gene : Glyma.16G218500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11999:SF113 - GLUTAMATE DECARBOXYLASE 2 Genomic Order:  2185
Name:  ? Glyma.16G218500 Secondary Identifier:  ? PAC:30561958
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUDEG-I-PWY Glycine max pathologic  
Gmax PWY0-1305 Glycine max pathologic  
Gmax PWY-4321 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G218500 0.5kb upstream 0.5kb upstream 5100 true Chr16: 37595927-37601026 Glycine max
Glyma.16G218500 0.5kb upstream 0.5kb upstream 500 false Chr16: 37595927-37596426 Glycine max
Glyma.16G218500 0.5kb downstream 0.5kb downstream 5100 true Chr16: 37596427-37601526 Glycine max
Glyma.16G218500 0.5kb downstream 0.5kb downstream 500 false Chr16: 37601027-37601526 Glycine max
Glyma.16G218500 1.0kb upstream 1.0kb upstream 5600 true Chr16: 37595427-37601026 Glycine max
Glyma.16G218500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37595427-37596426 Glycine max
Glyma.16G218500 1.0kb downstream 1.0kb downstream 5600 true Chr16: 37596427-37602026 Glycine max
Glyma.16G218500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37601027-37602026 Glycine max
Glyma.16G218500 2.0kb upstream 2.0kb upstream 6600 true Chr16: 37594427-37601026 Glycine max
Glyma.16G218500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37594427-37596426 Glycine max
Glyma.16G218500 2.0kb downstream 2.0kb downstream 6600 true Chr16: 37596427-37603026 Glycine max
Glyma.16G218500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37601027-37603026 Glycine max
Glyma.16G218500 5.0kb upstream 5.0kb upstream 9600 true Chr16: 37591427-37601026 Glycine max
Glyma.16G218500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37591427-37596426 Glycine max
Glyma.16G218500 5.0kb downstream 5.0kb downstream 9600 true Chr16: 37596427-37606026 Glycine max
Glyma.16G218500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37601027-37606026 Glycine max
Glyma.16G218500 10.0kb upstream 10.0kb upstream 14600 true Chr16: 37586427-37601026 Glycine max
Glyma.16G218500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37586427-37596426 Glycine max
Glyma.16G218500 10.0kb downstream 10.0kb downstream 14600 true Chr16: 37596427-37611026 Glycine max
Glyma.16G218500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37601027-37611026 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304634 5265 Fabidae View MSA
124069705 5270 Rosid View MSA
123740239 5271 Pentapetalae View MSA
122794594 5272 Eudicot View MSA
122050334 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9519 0.0 64.7957 High  
cufflinks 57.3395 0.0 169.817 High  
cufflinks 17.0966 0.0 45.7041    
cufflinks 159.875 0.0 585.672 High High
cufflinks 15.7678 0.0 42.085    
cufflinks 8.32754 0.0 22.5511   Low
cufflinks 60.0409 0.0 178.986 High  
cufflinks 100.358 0.0 329.152 High High
cufflinks 13.4321 0.0 35.8416    
cufflinks 65.688     High High
cufflinks 1.278       Low
cufflinks 14.789     High  
cufflinks 4.643        
cufflinks 0.949       Low
cufflinks 0.964       Low
cufflinks 34.8     High  
cufflinks 6.18     High  
cufflinks 25.53     High  
cufflinks 24.316     High  
cufflinks 38.638     High  
cufflinks 2.854        
cufflinks 38.876     High  
cufflinks 39.768     High  
cufflinks 1.542       Low
cufflinks 34.995     High  
cufflinks 1.803       Low

0 Strain