Gene : Glyma.16G218700 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG3818 - DNA polymerase epsilon, subunit B Genomic Order:  2187
Name:  ? Glyma.16G218700 Secondary Identifier:  ? PAC:30558782
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G218700 0.5kb upstream 0.5kb upstream 6178 true Chr16: 37607696-37613873 Glycine max
Glyma.16G218700 0.5kb upstream 0.5kb upstream 500 false Chr16: 37607696-37608195 Glycine max
Glyma.16G218700 0.5kb downstream 0.5kb downstream 6178 true Chr16: 37608196-37614373 Glycine max
Glyma.16G218700 0.5kb downstream 0.5kb downstream 500 false Chr16: 37613874-37614373 Glycine max
Glyma.16G218700 1.0kb upstream 1.0kb upstream 6678 true Chr16: 37607196-37613873 Glycine max
Glyma.16G218700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37607196-37608195 Glycine max
Glyma.16G218700 1.0kb downstream 1.0kb downstream 6678 true Chr16: 37608196-37614873 Glycine max
Glyma.16G218700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37613874-37614873 Glycine max
Glyma.16G218700 2.0kb upstream 2.0kb upstream 7678 true Chr16: 37606196-37613873 Glycine max
Glyma.16G218700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37606196-37608195 Glycine max
Glyma.16G218700 2.0kb downstream 2.0kb downstream 7678 true Chr16: 37608196-37615873 Glycine max
Glyma.16G218700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37613874-37615873 Glycine max
Glyma.16G218700 5.0kb upstream 5.0kb upstream 10678 true Chr16: 37603196-37613873 Glycine max
Glyma.16G218700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37603196-37608195 Glycine max
Glyma.16G218700 5.0kb downstream 5.0kb downstream 10678 true Chr16: 37608196-37618873 Glycine max
Glyma.16G218700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37613874-37618873 Glycine max
Glyma.16G218700 10.0kb upstream 10.0kb upstream 15678 true Chr16: 37598196-37613873 Glycine max
Glyma.16G218700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37598196-37608195 Glycine max
Glyma.16G218700 10.0kb downstream 10.0kb downstream 15678 true Chr16: 37608196-37623873 Glycine max
Glyma.16G218700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37613874-37623873 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305399 5265 Fabidae View MSA
124072678 5270 Rosid View MSA
123750341 5271 Pentapetalae View MSA
122791636 5272 Eudicot View MSA
122047942 5273 Angiosperm View MSA
121345202 5274 Embryophyte View MSA
123424017 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.564715 0.0 2.57082   Low
cufflinks 5.73068 0.0 23.0318   High
cufflinks 1.34654 0.0 5.31462    
cufflinks 2.70639 0.0 11.5048    
cufflinks 6.09613 0.0 23.5289   High
cufflinks 1.96836 0.0 9.33127    
cufflinks 3.28397 0.0 13.1546    
cufflinks 3.02268 0.0 12.3886    
cufflinks 4.48484 0.0 18.9771    
cufflinks 0.653        
cufflinks 0.199       Low
cufflinks 0.619        
cufflinks 1.425       High
cufflinks 1.903       High
cufflinks 0.245       Low
cufflinks 0.73        
cufflinks 0.282        
cufflinks 0.407        
cufflinks 2.09       High
cufflinks 0.436        
cufflinks 0.295        
cufflinks 0.618        
cufflinks 1.678       High
cufflinks 0.232       Low
cufflinks 0.566        
cufflinks 0.392        

0 Strain