Gene : Glyma.16G208700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11353:SF63 - T-COMPLEX PROTEIN 1 SUBUNIT GAMMA Genomic Order:  2087
Name:  ? Glyma.16G208700 Secondary Identifier:  ? PAC:30561506
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G208700 0.5kb upstream 0.5kb upstream 6038 true Chr16: 36814752-36820789 Glycine max
Glyma.16G208700 0.5kb upstream 0.5kb upstream 500 false Chr16: 36820290-36820789 Glycine max
Glyma.16G208700 0.5kb downstream 0.5kb downstream 6038 true Chr16: 36814252-36820289 Glycine max
Glyma.16G208700 0.5kb downstream 0.5kb downstream 500 false Chr16: 36814252-36814751 Glycine max
Glyma.16G208700 1.0kb upstream 1.0kb upstream 6538 true Chr16: 36814752-36821289 Glycine max
Glyma.16G208700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36820290-36821289 Glycine max
Glyma.16G208700 1.0kb downstream 1.0kb downstream 6538 true Chr16: 36813752-36820289 Glycine max
Glyma.16G208700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36813752-36814751 Glycine max
Glyma.16G208700 2.0kb upstream 2.0kb upstream 7538 true Chr16: 36814752-36822289 Glycine max
Glyma.16G208700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36820290-36822289 Glycine max
Glyma.16G208700 2.0kb downstream 2.0kb downstream 7538 true Chr16: 36812752-36820289 Glycine max
Glyma.16G208700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36812752-36814751 Glycine max
Glyma.16G208700 5.0kb upstream 5.0kb upstream 10538 true Chr16: 36814752-36825289 Glycine max
Glyma.16G208700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36820290-36825289 Glycine max
Glyma.16G208700 5.0kb downstream 5.0kb downstream 10538 true Chr16: 36809752-36820289 Glycine max
Glyma.16G208700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36809752-36814751 Glycine max
Glyma.16G208700 10.0kb upstream 10.0kb upstream 15538 true Chr16: 36814752-36830289 Glycine max
Glyma.16G208700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36820290-36830289 Glycine max
Glyma.16G208700 10.0kb downstream 10.0kb downstream 15538 true Chr16: 36804752-36820289 Glycine max
Glyma.16G208700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36804752-36814751 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309351 5265 Fabidae View MSA
124068834 5270 Rosid View MSA
123749348 5271 Pentapetalae View MSA
122787835 5272 Eudicot View MSA
122044598 5273 Angiosperm View MSA
121343839 5274 Embryophyte View MSA
123424692 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.6717 0.0 61.4044 High  
cufflinks 34.4519 0.0 96.5831 High  
cufflinks 17.9141 0.0 48.0628   Low
cufflinks 26.1073 0.0 71.4316 High  
cufflinks 49.2206 0.0 144.152 High High
cufflinks 31.6792 0.0 88.0574 High  
cufflinks 46.4901 0.0 134.962 High High
cufflinks 24.6738 0.0 67.227 High  
cufflinks 31.7142 0.0 88.1907 High  
cufflinks 10.385     High  
cufflinks 3.114       Low
cufflinks 9.928     High  
cufflinks 25.87     High High
cufflinks 33.369     High High
cufflinks 2.846       Low
cufflinks 7.309     High  
cufflinks 6.894     High  
cufflinks 10.055     High  
cufflinks 15.984     High High
cufflinks 4.78        
cufflinks 4.902        
cufflinks 6.032        
cufflinks 10.382     High  
cufflinks 3.093       Low
cufflinks 6.394        
cufflinks 6.72     High  

0 Strain