Gene : Glyma.17G029800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22847:SF361 - JOUBERIN Genomic Order:  298
Name:  ? Glyma.17G029800 Secondary Identifier:  ? PAC:30481710
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G029800 0.5kb upstream 0.5kb upstream 7844   true Chr17: 2192999-2200842 Glycine max
Glyma.17G029800 0.5kb upstream 0.5kb upstream 500   false Chr17: 2192999-2193498 Glycine max
Glyma.17G029800 0.5kb downstream 0.5kb downstream 7844   true Chr17: 2193499-2201342 Glycine max
Glyma.17G029800 0.5kb downstream 0.5kb downstream 500   false Chr17: 2200843-2201342 Glycine max
Glyma.17G029800 1.0kb upstream 1.0kb upstream 8344   true Chr17: 2192499-2200842 Glycine max
Glyma.17G029800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2192499-2193498 Glycine max
Glyma.17G029800 1.0kb downstream 1.0kb downstream 8344   true Chr17: 2193499-2201842 Glycine max
Glyma.17G029800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2200843-2201842 Glycine max
Glyma.17G029800 2.0kb upstream 2.0kb upstream 9344   true Chr17: 2191499-2200842 Glycine max
Glyma.17G029800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2191499-2193498 Glycine max
Glyma.17G029800 2.0kb downstream 2.0kb downstream 9344   true Chr17: 2193499-2202842 Glycine max
Glyma.17G029800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2200843-2202842 Glycine max
Glyma.17G029800 5.0kb upstream 5.0kb upstream 12344   true Chr17: 2188499-2200842 Glycine max
Glyma.17G029800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2188499-2193498 Glycine max
Glyma.17G029800 5.0kb downstream 5.0kb downstream 12344   true Chr17: 2193499-2205842 Glycine max
Glyma.17G029800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2200843-2205842 Glycine max
Glyma.17G029800 10.0kb upstream 10.0kb upstream 17344   true Chr17: 2183499-2200842 Glycine max
Glyma.17G029800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2183499-2193498 Glycine max
Glyma.17G029800 10.0kb downstream 10.0kb downstream 17344   true Chr17: 2193499-2210842 Glycine max
Glyma.17G029800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2200843-2210842 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306727 5265 Fabidae View MSA
124066327 5270 Rosid View MSA
123736466 5271 Pentapetalae View MSA
122792300 5272 Eudicot View MSA
122048492 5273 Angiosperm View MSA
121346834 5274 Embryophyte View MSA
123423807 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.01192 0.0 24.4446    
cufflinks 6.56386 0.0 20.5303    
cufflinks 2.93922 0.0 8.99187   Low
cufflinks 5.04302 0.0 16.4027    
cufflinks 12.3196 0.0 36.5434   High
cufflinks 6.8686 0.0 21.2298    
cufflinks 12.9259 0.0 38.4487   High
cufflinks 5.5411 0.0 17.4219    
cufflinks 7.76277 0.0 23.5837    
cufflinks 1.642        
cufflinks 0.556       Low
cufflinks 1.704        
cufflinks 5.584       High
cufflinks 8.603     High High
cufflinks 1.183        
cufflinks 1.654        
cufflinks 1.287        
cufflinks 1.529        
cufflinks 2.611        
cufflinks 1.305        
cufflinks 1.056        
cufflinks 1.42        
cufflinks 2.438        
cufflinks 0.724       Low
cufflinks 1.837        
cufflinks 1.122        

0 Strain