Gene : Glyma.17G029900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22814//PTHR22814:SF89 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Genomic Order:  299
Name:  ? Glyma.17G029900 Secondary Identifier:  ? PAC:30479917
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G029900 0.5kb upstream 0.5kb upstream 2597   true Chr17: 2200534-2203130 Glycine max
Glyma.17G029900 0.5kb upstream 0.5kb upstream 500   false Chr17: 2202631-2203130 Glycine max
Glyma.17G029900 0.5kb downstream 0.5kb downstream 2597   true Chr17: 2200034-2202630 Glycine max
Glyma.17G029900 0.5kb downstream 0.5kb downstream 500   false Chr17: 2200034-2200533 Glycine max
Glyma.17G029900 1.0kb upstream 1.0kb upstream 3097   true Chr17: 2200534-2203630 Glycine max
Glyma.17G029900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2202631-2203630 Glycine max
Glyma.17G029900 1.0kb downstream 1.0kb downstream 3097   true Chr17: 2199534-2202630 Glycine max
Glyma.17G029900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2199534-2200533 Glycine max
Glyma.17G029900 2.0kb upstream 2.0kb upstream 4097   true Chr17: 2200534-2204630 Glycine max
Glyma.17G029900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2202631-2204630 Glycine max
Glyma.17G029900 2.0kb downstream 2.0kb downstream 4097   true Chr17: 2198534-2202630 Glycine max
Glyma.17G029900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2198534-2200533 Glycine max
Glyma.17G029900 5.0kb upstream 5.0kb upstream 7097   true Chr17: 2200534-2207630 Glycine max
Glyma.17G029900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2202631-2207630 Glycine max
Glyma.17G029900 5.0kb downstream 5.0kb downstream 7097   true Chr17: 2195534-2202630 Glycine max
Glyma.17G029900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2195534-2200533 Glycine max
Glyma.17G029900 10.0kb upstream 10.0kb upstream 12097   true Chr17: 2200534-2212630 Glycine max
Glyma.17G029900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2202631-2212630 Glycine max
Glyma.17G029900 10.0kb downstream 10.0kb downstream 12097   true Chr17: 2190534-2202630 Glycine max
Glyma.17G029900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2190534-2200533 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309825 5265 Fabidae View MSA
124070264 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.983532 0.0 6.86371    
cufflinks 0.800222 0.0 5.7049    
cufflinks 0.637157 0.0 4.03469   Low
cufflinks 0.777733 0.0 5.15319    
cufflinks 1.81486 0.0 11.5665   High
cufflinks 1.02461 0.0 6.69218    
cufflinks 1.42948 0.0 10.165    
cufflinks 1.53141 0.0 8.11183    
cufflinks 1.36792 0.0 8.31081    
cufflinks 0.476       High
cufflinks 0.224        
cufflinks 0.114     Low Low
cufflinks 0.391       High
cufflinks 0.139        
cufflinks 0.084       Low
cufflinks 0.119       Low
cufflinks 0.244        
cufflinks 0.417       High
cufflinks 0.181        
cufflinks 0.161        
cufflinks 0.239        
cufflinks 0.284        
cufflinks 0.149        
cufflinks 0.209        
cufflinks 0.22        
cufflinks 0.367       High

0 Strain