Gene : Glyma.17G030100 G. max Wm82.a2.v1
Defline:  (1 of 39) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  301
Name:  ? Glyma.17G030100 Secondary Identifier:  ? PAC:30480175
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G030100 0.5kb upstream 0.5kb upstream 1708   true Chr17: 2210399-2212106 Glycine max
Glyma.17G030100 0.5kb upstream 0.5kb upstream 500   false Chr17: 2211607-2212106 Glycine max
Glyma.17G030100 0.5kb downstream 0.5kb downstream 1708   true Chr17: 2209899-2211606 Glycine max
Glyma.17G030100 0.5kb downstream 0.5kb downstream 500   false Chr17: 2209899-2210398 Glycine max
Glyma.17G030100 1.0kb upstream 1.0kb upstream 2208   true Chr17: 2210399-2212606 Glycine max
Glyma.17G030100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2211607-2212606 Glycine max
Glyma.17G030100 1.0kb downstream 1.0kb downstream 2208   true Chr17: 2209399-2211606 Glycine max
Glyma.17G030100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2209399-2210398 Glycine max
Glyma.17G030100 2.0kb upstream 2.0kb upstream 3208   true Chr17: 2210399-2213606 Glycine max
Glyma.17G030100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2211607-2213606 Glycine max
Glyma.17G030100 2.0kb downstream 2.0kb downstream 3208   true Chr17: 2208399-2211606 Glycine max
Glyma.17G030100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2208399-2210398 Glycine max
Glyma.17G030100 5.0kb upstream 5.0kb upstream 6208   true Chr17: 2210399-2216606 Glycine max
Glyma.17G030100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2211607-2216606 Glycine max
Glyma.17G030100 5.0kb downstream 5.0kb downstream 6208   true Chr17: 2205399-2211606 Glycine max
Glyma.17G030100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2205399-2210398 Glycine max
Glyma.17G030100 10.0kb upstream 10.0kb upstream 11208   true Chr17: 2210399-2221606 Glycine max
Glyma.17G030100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2211607-2221606 Glycine max
Glyma.17G030100 10.0kb downstream 10.0kb downstream 11208   true Chr17: 2200399-2211606 Glycine max
Glyma.17G030100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2200399-2210398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 125.846 0.0 357.081 High  
cufflinks 3.9154 0.0 13.2197    
cufflinks 31.281 0.0 83.8035 High  
cufflinks 2.04069 0.0 7.29632   Low
cufflinks 133.315 0.0 380.659 High  
cufflinks 1608.94 0.0 8974.83 High High
cufflinks 0.418293 0.0 1.62263   Low
cufflinks 40.009 0.0 106.771 High  
cufflinks 134.39 0.0 384.924 High  
cufflinks 60.396     High  
cufflinks 460.488     High High
cufflinks 33.344     High  
cufflinks 120.07     High  
cufflinks 71.702     High  
cufflinks 78.906     High  
cufflinks 1.763       Low
cufflinks 100.78     High  
cufflinks 3.336       Low
cufflinks 7.931     High  
cufflinks 2.69       Low
cufflinks 412.634     High High
cufflinks 8.353     High  
cufflinks 6.387        
cufflinks 745.11     High High
cufflinks 2.173       Low
cufflinks 272.74     High High

0 Strain