Gene : Glyma.17G030200 G. max Wm82.a2.v1
Defline:  (1 of 39) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  302
Name:  ? Glyma.17G030200 Secondary Identifier:  ? PAC:30481734
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G030200 0.5kb upstream 0.5kb upstream 1575   true Chr17: 2215796-2217370 Glycine max
Glyma.17G030200 0.5kb upstream 0.5kb upstream 500   false Chr17: 2216871-2217370 Glycine max
Glyma.17G030200 0.5kb downstream 0.5kb downstream 1575   true Chr17: 2215296-2216870 Glycine max
Glyma.17G030200 0.5kb downstream 0.5kb downstream 500   false Chr17: 2215296-2215795 Glycine max
Glyma.17G030200 1.0kb upstream 1.0kb upstream 2075   true Chr17: 2215796-2217870 Glycine max
Glyma.17G030200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2216871-2217870 Glycine max
Glyma.17G030200 1.0kb downstream 1.0kb downstream 2075   true Chr17: 2214796-2216870 Glycine max
Glyma.17G030200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2214796-2215795 Glycine max
Glyma.17G030200 2.0kb upstream 2.0kb upstream 3075   true Chr17: 2215796-2218870 Glycine max
Glyma.17G030200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2216871-2218870 Glycine max
Glyma.17G030200 2.0kb downstream 2.0kb downstream 3075   true Chr17: 2213796-2216870 Glycine max
Glyma.17G030200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2213796-2215795 Glycine max
Glyma.17G030200 5.0kb upstream 5.0kb upstream 6075   true Chr17: 2215796-2221870 Glycine max
Glyma.17G030200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2216871-2221870 Glycine max
Glyma.17G030200 5.0kb downstream 5.0kb downstream 6075   true Chr17: 2210796-2216870 Glycine max
Glyma.17G030200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2210796-2215795 Glycine max
Glyma.17G030200 10.0kb upstream 10.0kb upstream 11075   true Chr17: 2215796-2226870 Glycine max
Glyma.17G030200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2216871-2226870 Glycine max
Glyma.17G030200 10.0kb downstream 10.0kb downstream 11075   true Chr17: 2205796-2216870 Glycine max
Glyma.17G030200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2205796-2215795 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.634 0.0 327.758 High  
cufflinks 17.4623 0.0 47.6776    
cufflinks 103.637 0.0 295.745 High  
cufflinks 14.6328 0.0 40.4848    
cufflinks 385.356 0.0 1412.04 High  
cufflinks 15157.5 15121.5 15193.5 High High
cufflinks 4.43878 0.0 14.2888   Low
cufflinks 8.72355 0.0 25.4755    
cufflinks 615.481 0.0 2608.9 High  
cufflinks 23.53     High  
cufflinks 1054.027     High High
cufflinks 127.636     High  
cufflinks 622.721     High  
cufflinks 95.049     High  
cufflinks 49.061     High  
cufflinks 16.086     High  
cufflinks 469.996     High  
cufflinks 10.168     High Low
cufflinks 42.746     High  
cufflinks 17.029     High  
cufflinks 1468.301     High High
cufflinks 21.64     High  
cufflinks 18.88     High  
cufflinks 2108.351     High High
cufflinks 19.088     High  
cufflinks 1394.505     High High

0 Strain