Gene : Glyma.17G030000 G. max Wm82.a2.v1
Defline:  (1 of 39) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  300
Name:  ? Glyma.17G030000 Secondary Identifier:  ? PAC:30478548
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G030000 0.5kb upstream 0.5kb upstream 1599   true Chr17: 2203480-2205078 Glycine max
Glyma.17G030000 0.5kb upstream 0.5kb upstream 500   false Chr17: 2204579-2205078 Glycine max
Glyma.17G030000 0.5kb downstream 0.5kb downstream 1599   true Chr17: 2202980-2204578 Glycine max
Glyma.17G030000 0.5kb downstream 0.5kb downstream 500   false Chr17: 2202980-2203479 Glycine max
Glyma.17G030000 1.0kb upstream 1.0kb upstream 2099   true Chr17: 2203480-2205578 Glycine max
Glyma.17G030000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2204579-2205578 Glycine max
Glyma.17G030000 1.0kb downstream 1.0kb downstream 2099   true Chr17: 2202480-2204578 Glycine max
Glyma.17G030000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2202480-2203479 Glycine max
Glyma.17G030000 2.0kb upstream 2.0kb upstream 3099   true Chr17: 2203480-2206578 Glycine max
Glyma.17G030000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2204579-2206578 Glycine max
Glyma.17G030000 2.0kb downstream 2.0kb downstream 3099   true Chr17: 2201480-2204578 Glycine max
Glyma.17G030000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2201480-2203479 Glycine max
Glyma.17G030000 5.0kb upstream 5.0kb upstream 6099   true Chr17: 2203480-2209578 Glycine max
Glyma.17G030000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2204579-2209578 Glycine max
Glyma.17G030000 5.0kb downstream 5.0kb downstream 6099   true Chr17: 2198480-2204578 Glycine max
Glyma.17G030000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2198480-2203479 Glycine max
Glyma.17G030000 10.0kb upstream 10.0kb upstream 11099   true Chr17: 2203480-2214578 Glycine max
Glyma.17G030000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2204579-2214578 Glycine max
Glyma.17G030000 10.0kb downstream 10.0kb downstream 11099   true Chr17: 2193480-2204578 Glycine max
Glyma.17G030000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2193480-2203479 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312646 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4035 0.0 47.5731   High
cufflinks 0.224422 0.0 0.882913 Low Low
cufflinks 3.87884 0.0 12.6399    
cufflinks 1.74058 0.0 6.19164    
cufflinks 4.88874 0.0 15.6178    
cufflinks 26.8701 0.0 71.9538 High High
cufflinks 1.20701 0.0 4.40661    
cufflinks 7.41197 0.0 22.1323    
cufflinks 6.09658 0.0 18.7512    
cufflinks 3.12        
cufflinks 74.359     High High
cufflinks 4.235        
cufflinks 14.389     High  
cufflinks 0.485       Low
cufflinks 13.412     High  
cufflinks 1.092        
cufflinks 39.036     High High
cufflinks 0.839       Low
cufflinks 0.967        
cufflinks 1.236        
cufflinks 29.755     High  
cufflinks 4.734        
cufflinks 1.113        
cufflinks 217.37     High High
cufflinks 1.106        
cufflinks 33.157     High  

0 Strain