Gene : Glyma.17G030400 G. max Wm82.a2.v1
Defline:  (1 of 39) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  304
Name:  ? Glyma.17G030400 Secondary Identifier:  ? PAC:30479604
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G030400 0.5kb upstream 0.5kb upstream 1550   true Chr17: 2222144-2223693 Glycine max
Glyma.17G030400 0.5kb upstream 0.5kb upstream 500   false Chr17: 2223194-2223693 Glycine max
Glyma.17G030400 0.5kb downstream 0.5kb downstream 1550   true Chr17: 2221644-2223193 Glycine max
Glyma.17G030400 0.5kb downstream 0.5kb downstream 500   false Chr17: 2221644-2222143 Glycine max
Glyma.17G030400 1.0kb upstream 1.0kb upstream 2050   true Chr17: 2222144-2224193 Glycine max
Glyma.17G030400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2223194-2224193 Glycine max
Glyma.17G030400 1.0kb downstream 1.0kb downstream 2050   true Chr17: 2221144-2223193 Glycine max
Glyma.17G030400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2221144-2222143 Glycine max
Glyma.17G030400 2.0kb upstream 2.0kb upstream 3050   true Chr17: 2222144-2225193 Glycine max
Glyma.17G030400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2223194-2225193 Glycine max
Glyma.17G030400 2.0kb downstream 2.0kb downstream 3050   true Chr17: 2220144-2223193 Glycine max
Glyma.17G030400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2220144-2222143 Glycine max
Glyma.17G030400 5.0kb upstream 5.0kb upstream 6050   true Chr17: 2222144-2228193 Glycine max
Glyma.17G030400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2223194-2228193 Glycine max
Glyma.17G030400 5.0kb downstream 5.0kb downstream 6050   true Chr17: 2217144-2223193 Glycine max
Glyma.17G030400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2217144-2222143 Glycine max
Glyma.17G030400 10.0kb upstream 10.0kb upstream 11050   true Chr17: 2222144-2233193 Glycine max
Glyma.17G030400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2223194-2233193 Glycine max
Glyma.17G030400 10.0kb downstream 10.0kb downstream 11050   true Chr17: 2212144-2223193 Glycine max
Glyma.17G030400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2212144-2222143 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1555 0.0 52.3189    
cufflinks 0.12513 0.0 0.505242 Low  
cufflinks 0.27423 0.0 1.0748    
cufflinks 0.735649 0.0 2.76433    
cufflinks 9.17873 0.0 27.0116    
cufflinks 312.781 0.0 1065.27 High High
cufflinks 0.294283 0.0 1.15103    
cufflinks 0.050058 0.0 0.213457 Low Low
cufflinks 5.35179 0.0 16.9894    
cufflinks 1.236        
cufflinks 57.152     High High
cufflinks 2.512        
cufflinks 24.403     High  
cufflinks 23.339     High  
cufflinks 14.471     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.635        
cufflinks 0.072     Low Low
cufflinks 2.383        
cufflinks 0.088     Low Low
cufflinks 43.484     High  
cufflinks 0.026     Low Low
cufflinks 1.161        
cufflinks 207.544     High High
cufflinks 0.021     Low Low
cufflinks 80.646     High High

0 Strain