Gene : Glyma.17G030500 G. max Wm82.a2.v1
Defline:  (1 of 20) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  305
Name:  ? Glyma.17G030500 Secondary Identifier:  ? PAC:30479096
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G030500 0.5kb upstream 0.5kb upstream 4342   true Chr17: 2228473-2232814 Glycine max
Glyma.17G030500 0.5kb upstream 0.5kb upstream 500   false Chr17: 2228473-2228972 Glycine max
Glyma.17G030500 0.5kb downstream 0.5kb downstream 4342   true Chr17: 2228973-2233314 Glycine max
Glyma.17G030500 0.5kb downstream 0.5kb downstream 500   false Chr17: 2232815-2233314 Glycine max
Glyma.17G030500 1.0kb upstream 1.0kb upstream 4842   true Chr17: 2227973-2232814 Glycine max
Glyma.17G030500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2227973-2228972 Glycine max
Glyma.17G030500 1.0kb downstream 1.0kb downstream 4842   true Chr17: 2228973-2233814 Glycine max
Glyma.17G030500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2232815-2233814 Glycine max
Glyma.17G030500 2.0kb upstream 2.0kb upstream 5842   true Chr17: 2226973-2232814 Glycine max
Glyma.17G030500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2226973-2228972 Glycine max
Glyma.17G030500 2.0kb downstream 2.0kb downstream 5842   true Chr17: 2228973-2234814 Glycine max
Glyma.17G030500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2232815-2234814 Glycine max
Glyma.17G030500 5.0kb upstream 5.0kb upstream 8842   true Chr17: 2223973-2232814 Glycine max
Glyma.17G030500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2223973-2228972 Glycine max
Glyma.17G030500 5.0kb downstream 5.0kb downstream 8842   true Chr17: 2228973-2237814 Glycine max
Glyma.17G030500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2232815-2237814 Glycine max
Glyma.17G030500 10.0kb upstream 10.0kb upstream 13842   true Chr17: 2218973-2232814 Glycine max
Glyma.17G030500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2218973-2228972 Glycine max
Glyma.17G030500 10.0kb downstream 10.0kb downstream 13842   true Chr17: 2228973-2242814 Glycine max
Glyma.17G030500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2232815-2242814 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303756 5265 Fabidae View MSA
124072368 5270 Rosid View MSA
123748837 5271 Pentapetalae View MSA
122797134 5272 Eudicot View MSA
122049051 5273 Angiosperm View MSA
121347224 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57976 0.0 10.9264    
cufflinks 4.01219 0.0 12.0703    
cufflinks 3.26567 0.0 10.1084   Low
cufflinks 6.07454 0.0 17.3047   High
cufflinks 5.24194 0.0 15.1622    
cufflinks 4.77427 0.0 13.9853    
cufflinks 6.63036 0.0 18.7094   High
cufflinks 3.58923 0.0 10.9512    
cufflinks 4.68945 0.0 13.7803    
cufflinks 2.464        
cufflinks 4.772       High
cufflinks 1.867       Low
cufflinks 2.617        
cufflinks 2.645        
cufflinks 3.677        
cufflinks 2.368        
cufflinks 5.585       High
cufflinks 2.051        
cufflinks 2.065        
cufflinks 2.126        
cufflinks 5.741     High High
cufflinks 1.89       Low
cufflinks 2.159        
cufflinks 4.326        
cufflinks 1.985        
cufflinks 6.034       High

0 Strain