Gene : Glyma.17G031800 G. max Wm82.a2.v1
Defline:  (1 of 5) 6.2.1.1//6.2.1.2 - Acetate--CoA ligase / Acyl-activating enzyme // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  318
Name:  ? Glyma.17G031800 Secondary Identifier:  ? PAC:30478676
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY-321 Glycine max pathologic  
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-5143 Glycine max pathologic  
Gmax PWY-5147 Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5885 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY-6733 Glycine max pathologic  
Gmax PWY-6803 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G031800 0.5kb upstream 0.5kb upstream 4891   true Chr17: 2331626-2336516 Glycine max
Glyma.17G031800 0.5kb upstream 0.5kb upstream 500   false Chr17: 2336017-2336516 Glycine max
Glyma.17G031800 0.5kb downstream 0.5kb downstream 4891   true Chr17: 2331126-2336016 Glycine max
Glyma.17G031800 0.5kb downstream 0.5kb downstream 500   false Chr17: 2331126-2331625 Glycine max
Glyma.17G031800 1.0kb upstream 1.0kb upstream 5391   true Chr17: 2331626-2337016 Glycine max
Glyma.17G031800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2336017-2337016 Glycine max
Glyma.17G031800 1.0kb downstream 1.0kb downstream 5391   true Chr17: 2330626-2336016 Glycine max
Glyma.17G031800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2330626-2331625 Glycine max
Glyma.17G031800 2.0kb upstream 2.0kb upstream 6391   true Chr17: 2331626-2338016 Glycine max
Glyma.17G031800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2336017-2338016 Glycine max
Glyma.17G031800 2.0kb downstream 2.0kb downstream 6391   true Chr17: 2329626-2336016 Glycine max
Glyma.17G031800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2329626-2331625 Glycine max
Glyma.17G031800 5.0kb upstream 5.0kb upstream 9391   true Chr17: 2331626-2341016 Glycine max
Glyma.17G031800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2336017-2341016 Glycine max
Glyma.17G031800 5.0kb downstream 5.0kb downstream 9391   true Chr17: 2326626-2336016 Glycine max
Glyma.17G031800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2326626-2331625 Glycine max
Glyma.17G031800 10.0kb upstream 10.0kb upstream 14391   true Chr17: 2331626-2346016 Glycine max
Glyma.17G031800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2336017-2346016 Glycine max
Glyma.17G031800 10.0kb downstream 10.0kb downstream 14391   true Chr17: 2321626-2336016 Glycine max
Glyma.17G031800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2321626-2331625 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308725 5265 Fabidae View MSA
124067015 5270 Rosid View MSA
123740206 5271 Pentapetalae View MSA
122793693 5272 Eudicot View MSA
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3253 0.0 54.8561   High
cufflinks 2.6994 0.0 8.11452    
cufflinks 5.48271 0.0 15.1275    
cufflinks 1.66112 0.0 5.34175   Low
cufflinks 5.07126 0.0 14.1154    
cufflinks 4.85959 0.0 13.5664    
cufflinks 2.74342 0.0 8.23026    
cufflinks 1.75539 0.0 5.60126   Low
cufflinks 2.91331 0.0 8.64698    
cufflinks 0.721       Low
cufflinks 1.505        
cufflinks 1.837        
cufflinks 0.964        
cufflinks 0.888        
cufflinks 0.989        
cufflinks 1.156        
cufflinks 6.379     High High
cufflinks 1.308        
cufflinks 2.056        
cufflinks 1.081        
cufflinks 1.929        
cufflinks 1.271        
cufflinks 1.256        
cufflinks 2.836       High
cufflinks 1.22        
cufflinks 1.347        

0 Strain