Gene : Glyma.17G032900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21561:SF12 - INO80 COMPLEX SUBUNIT B Genomic Order:  329
Name:  ? Glyma.17G032900 Secondary Identifier:  ? PAC:30479936
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G032900 0.5kb upstream 0.5kb upstream 2902   true Chr17: 2408152-2411053 Glycine max
Glyma.17G032900 0.5kb upstream 0.5kb upstream 500   false Chr17: 2410554-2411053 Glycine max
Glyma.17G032900 0.5kb downstream 0.5kb downstream 2902   true Chr17: 2407652-2410553 Glycine max
Glyma.17G032900 0.5kb downstream 0.5kb downstream 500   false Chr17: 2407652-2408151 Glycine max
Glyma.17G032900 1.0kb upstream 1.0kb upstream 3402   true Chr17: 2408152-2411553 Glycine max
Glyma.17G032900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2410554-2411553 Glycine max
Glyma.17G032900 1.0kb downstream 1.0kb downstream 3402   true Chr17: 2407152-2410553 Glycine max
Glyma.17G032900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2407152-2408151 Glycine max
Glyma.17G032900 2.0kb upstream 2.0kb upstream 4402   true Chr17: 2408152-2412553 Glycine max
Glyma.17G032900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2410554-2412553 Glycine max
Glyma.17G032900 2.0kb downstream 2.0kb downstream 4402   true Chr17: 2406152-2410553 Glycine max
Glyma.17G032900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2406152-2408151 Glycine max
Glyma.17G032900 5.0kb upstream 5.0kb upstream 7402   true Chr17: 2408152-2415553 Glycine max
Glyma.17G032900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2410554-2415553 Glycine max
Glyma.17G032900 5.0kb downstream 5.0kb downstream 7402   true Chr17: 2403152-2410553 Glycine max
Glyma.17G032900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2403152-2408151 Glycine max
Glyma.17G032900 10.0kb upstream 10.0kb upstream 12402   true Chr17: 2408152-2420553 Glycine max
Glyma.17G032900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2410554-2420553 Glycine max
Glyma.17G032900 10.0kb downstream 10.0kb downstream 12402   true Chr17: 2398152-2410553 Glycine max
Glyma.17G032900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2398152-2408151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041502 5273 Angiosperm View MSA
122244297 5265 Fabidae Singleton cluster - no MSA
124069282 5270 Rosid View MSA
123742118 5271 Pentapetalae View MSA
122796664 5272 Eudicot View MSA
121348202 5274 Embryophyte View MSA
123380771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.420874 0.0 1.58889    
cufflinks 0.265982 0.0 1.02436    
cufflinks 0.106016 0.0 0.422061 Low  
cufflinks 0.197006 0.0 0.76772    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0300083 0.0 0.128601 Low Low
cufflinks 1.01653 0.0 3.66834   High
cufflinks 0.0155755 0.0 0.0704943 Low Low
cufflinks 0.351679 0.0 1.33752    
cufflinks 0.054     Low  
cufflinks 0.017     Low Low
cufflinks 0.163        
cufflinks 0.074     Low  
cufflinks 0.015     Low Low
cufflinks 0.33        
cufflinks 0.494       High
cufflinks 0.021     Low Low
cufflinks 0.347        
cufflinks 0.304        
cufflinks 0.581       High
cufflinks 0.036     Low  
cufflinks 0.636       High
cufflinks 0.405        
cufflinks 0.033     Low  
cufflinks 0.661       High
cufflinks 0.025     Low Low

0 Strain