Gene : Glyma.17G033000 G. max Wm82.a2.v1
Defline:  (1 of 70) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  330
Name:  ? Glyma.17G033000 Secondary Identifier:  ? PAC:30479343
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G033000 0.5kb upstream 0.5kb upstream 3347   true Chr17: 2412135-2415481 Glycine max
Glyma.17G033000 0.5kb upstream 0.5kb upstream 500   false Chr17: 2414982-2415481 Glycine max
Glyma.17G033000 0.5kb downstream 0.5kb downstream 3347   true Chr17: 2411635-2414981 Glycine max
Glyma.17G033000 0.5kb downstream 0.5kb downstream 500   false Chr17: 2411635-2412134 Glycine max
Glyma.17G033000 1.0kb upstream 1.0kb upstream 3847   true Chr17: 2412135-2415981 Glycine max
Glyma.17G033000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2414982-2415981 Glycine max
Glyma.17G033000 1.0kb downstream 1.0kb downstream 3847   true Chr17: 2411135-2414981 Glycine max
Glyma.17G033000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2411135-2412134 Glycine max
Glyma.17G033000 2.0kb upstream 2.0kb upstream 4847   true Chr17: 2412135-2416981 Glycine max
Glyma.17G033000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2414982-2416981 Glycine max
Glyma.17G033000 2.0kb downstream 2.0kb downstream 4847   true Chr17: 2410135-2414981 Glycine max
Glyma.17G033000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2410135-2412134 Glycine max
Glyma.17G033000 5.0kb upstream 5.0kb upstream 7847   true Chr17: 2412135-2419981 Glycine max
Glyma.17G033000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2414982-2419981 Glycine max
Glyma.17G033000 5.0kb downstream 5.0kb downstream 7847   true Chr17: 2407135-2414981 Glycine max
Glyma.17G033000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2407135-2412134 Glycine max
Glyma.17G033000 10.0kb upstream 10.0kb upstream 12847   true Chr17: 2412135-2424981 Glycine max
Glyma.17G033000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2414982-2424981 Glycine max
Glyma.17G033000 10.0kb downstream 10.0kb downstream 12847   true Chr17: 2402135-2414981 Glycine max
Glyma.17G033000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2402135-2412134 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305226 5265 Fabidae View MSA
124070263 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.1206 0.0 0.477357 Low  
cufflinks 0.00842738 0.0 0.0437168 Low Low
cufflinks 0.0553869 0.0 0.236328 Low  
cufflinks 0.046307 0.0 0.19113 Low  
cufflinks 0.038126 0.0 0.165482 Low  
cufflinks 0.0181958 0.0 0.085738 Low  
cufflinks 0.184715 0.0 1.51421 Low High
cufflinks 0.0548522 0.0 0.225606 Low  
cufflinks 0.068     Low High
cufflinks 0.014     Low  
cufflinks 0.018     Low  
cufflinks 0.023     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.029     Low  
cufflinks 0.018     Low  
cufflinks 0.016     Low  
cufflinks 0.016     Low  
cufflinks 0.018     Low  
cufflinks 0.004     Low Low
cufflinks 0.007     Low Low
cufflinks 0.006     Low Low
cufflinks 0.006     Low Low
cufflinks 0.042     Low High

0 Strain