Gene : Glyma.17G033500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF69 - NUCLEOPORIN-RELATED Genomic Order:  335
Name:  ? Glyma.17G033500 Secondary Identifier:  ? PAC:30482256
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G033500 0.5kb upstream 0.5kb upstream 1043   true Chr17: 2451841-2452883 Glycine max
Glyma.17G033500 0.5kb upstream 0.5kb upstream 500   false Chr17: 2451841-2452340 Glycine max
Glyma.17G033500 0.5kb downstream 0.5kb downstream 1043   true Chr17: 2452341-2453383 Glycine max
Glyma.17G033500 0.5kb downstream 0.5kb downstream 500   false Chr17: 2452884-2453383 Glycine max
Glyma.17G033500 1.0kb upstream 1.0kb upstream 1543   true Chr17: 2451341-2452883 Glycine max
Glyma.17G033500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2451341-2452340 Glycine max
Glyma.17G033500 1.0kb downstream 1.0kb downstream 1543   true Chr17: 2452341-2453883 Glycine max
Glyma.17G033500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2452884-2453883 Glycine max
Glyma.17G033500 2.0kb upstream 2.0kb upstream 2543   true Chr17: 2450341-2452883 Glycine max
Glyma.17G033500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2450341-2452340 Glycine max
Glyma.17G033500 2.0kb downstream 2.0kb downstream 2543   true Chr17: 2452341-2454883 Glycine max
Glyma.17G033500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2452884-2454883 Glycine max
Glyma.17G033500 5.0kb upstream 5.0kb upstream 5543   true Chr17: 2447341-2452883 Glycine max
Glyma.17G033500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2447341-2452340 Glycine max
Glyma.17G033500 5.0kb downstream 5.0kb downstream 5543   true Chr17: 2452341-2457883 Glycine max
Glyma.17G033500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2452884-2457883 Glycine max
Glyma.17G033500 10.0kb upstream 10.0kb upstream 10543   true Chr17: 2442341-2452883 Glycine max
Glyma.17G033500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2442341-2452340 Glycine max
Glyma.17G033500 10.0kb downstream 10.0kb downstream 10543   true Chr17: 2452341-2462883 Glycine max
Glyma.17G033500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2452884-2462883 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
122314276 5265 Fabidae View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.343279 0.0 1.3664    
cufflinks 0.142701 0.0 0.591754 Low  
cufflinks 0.125308 0.0 0.524552 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.645916 0.0 2.50252    
cufflinks 1.54318 0.0 5.77387   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0910709 0.0 0.388344 Low Low
cufflinks 0.550004 0.0 2.14694    
cufflinks 0.214        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.263       High
cufflinks 0.09        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.282       High
cufflinks 0.081     Low  
cufflinks 0.027     Low  
cufflinks 0.068     Low  
cufflinks 0.039     Low  
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.035     Low  
cufflinks 0.026     Low  

0 Strain