Gene : Glyma.17G024000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23244:SF308 - KELCH REPEAT-CONTAINING PROTEIN Genomic Order:  240
Name:  ? Glyma.17G024000 Secondary Identifier:  ? PAC:30482251
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G024000 0.5kb upstream 0.5kb upstream 6945   true Chr17: 1750107-1757051 Glycine max
Glyma.17G024000 0.5kb upstream 0.5kb upstream 500   false Chr17: 1756552-1757051 Glycine max
Glyma.17G024000 0.5kb downstream 0.5kb downstream 6945   true Chr17: 1749607-1756551 Glycine max
Glyma.17G024000 0.5kb downstream 0.5kb downstream 500   false Chr17: 1749607-1750106 Glycine max
Glyma.17G024000 1.0kb upstream 1.0kb upstream 7445   true Chr17: 1750107-1757551 Glycine max
Glyma.17G024000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1756552-1757551 Glycine max
Glyma.17G024000 1.0kb downstream 1.0kb downstream 7445   true Chr17: 1749107-1756551 Glycine max
Glyma.17G024000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1749107-1750106 Glycine max
Glyma.17G024000 2.0kb upstream 2.0kb upstream 8445   true Chr17: 1750107-1758551 Glycine max
Glyma.17G024000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1756552-1758551 Glycine max
Glyma.17G024000 2.0kb downstream 2.0kb downstream 8445   true Chr17: 1748107-1756551 Glycine max
Glyma.17G024000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1748107-1750106 Glycine max
Glyma.17G024000 5.0kb upstream 5.0kb upstream 11445   true Chr17: 1750107-1761551 Glycine max
Glyma.17G024000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1756552-1761551 Glycine max
Glyma.17G024000 5.0kb downstream 5.0kb downstream 11445   true Chr17: 1745107-1756551 Glycine max
Glyma.17G024000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1745107-1750106 Glycine max
Glyma.17G024000 10.0kb upstream 10.0kb upstream 16445   true Chr17: 1750107-1766551 Glycine max
Glyma.17G024000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1756552-1766551 Glycine max
Glyma.17G024000 10.0kb downstream 10.0kb downstream 16445   true Chr17: 1740107-1756551 Glycine max
Glyma.17G024000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1740107-1750106 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311880 5265 Fabidae View MSA
124062576 5270 Rosid View MSA
123748227 5271 Pentapetalae View MSA
122785945 5272 Eudicot View MSA
122041757 5273 Angiosperm View MSA
121349147 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.19461 0.0 14.2083   Low
cufflinks 21.4724 0.0 58.848 High High
cufflinks 7.72044 0.0 20.6864    
cufflinks 15.5175 0.0 41.7452   High
cufflinks 9.7877 0.0 26.1206    
cufflinks 5.27007 0.0 14.4036   Low
cufflinks 10.8203 0.0 28.8674    
cufflinks 8.62844 0.0 23.0597    
cufflinks 6.26125 0.0 16.9352    
cufflinks 2.34        
cufflinks 0.676       Low
cufflinks 5.19        
cufflinks 6.021        
cufflinks 6.371        
cufflinks 0.782       Low
cufflinks 12.154     High High
cufflinks 1.815        
cufflinks 5.719        
cufflinks 12.455     High High
cufflinks 14.952     High High
cufflinks 0.978       Low
cufflinks 12.151     High High
cufflinks 9.426     High  
cufflinks 0.592       Low
cufflinks 12.625     High High
cufflinks 1.828        

0 Strain