Gene : Glyma.17G024300 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  243
Name:  ? Glyma.17G024300 Secondary Identifier:  ? PAC:30481376
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G024300 0.5kb upstream 0.5kb upstream 2259   true Chr17: 1774163-1776421 Glycine max
Glyma.17G024300 0.5kb upstream 0.5kb upstream 500   false Chr17: 1774163-1774662 Glycine max
Glyma.17G024300 0.5kb downstream 0.5kb downstream 2259   true Chr17: 1774663-1776921 Glycine max
Glyma.17G024300 0.5kb downstream 0.5kb downstream 500   false Chr17: 1776422-1776921 Glycine max
Glyma.17G024300 1.0kb upstream 1.0kb upstream 2759   true Chr17: 1773663-1776421 Glycine max
Glyma.17G024300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1773663-1774662 Glycine max
Glyma.17G024300 1.0kb downstream 1.0kb downstream 2759   true Chr17: 1774663-1777421 Glycine max
Glyma.17G024300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1776422-1777421 Glycine max
Glyma.17G024300 2.0kb upstream 2.0kb upstream 3759   true Chr17: 1772663-1776421 Glycine max
Glyma.17G024300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1772663-1774662 Glycine max
Glyma.17G024300 2.0kb downstream 2.0kb downstream 3759   true Chr17: 1774663-1778421 Glycine max
Glyma.17G024300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1776422-1778421 Glycine max
Glyma.17G024300 5.0kb upstream 5.0kb upstream 6759   true Chr17: 1769663-1776421 Glycine max
Glyma.17G024300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1769663-1774662 Glycine max
Glyma.17G024300 5.0kb downstream 5.0kb downstream 6759   true Chr17: 1774663-1781421 Glycine max
Glyma.17G024300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1776422-1781421 Glycine max
Glyma.17G024300 10.0kb upstream 10.0kb upstream 11759   true Chr17: 1764663-1776421 Glycine max
Glyma.17G024300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1764663-1774662 Glycine max
Glyma.17G024300 10.0kb downstream 10.0kb downstream 11759   true Chr17: 1774663-1786421 Glycine max
Glyma.17G024300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1776422-1786421 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305116 5265 Fabidae View MSA
124050162 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0410706 0.0 0.170312 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00760247 0.0 0.0365529 Low Low
cufflinks 0.640691 0.0 2.35577   High
cufflinks 0.0530561 0.0 0.216922 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0135153 0.0 0.0611699 Low  
cufflinks 0.859418 0.0 3.10052   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.431       High
cufflinks 0.083        
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.063     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.091        

0 Strain