Gene : Glyma.17G024400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED Genomic Order:  244
Name:  ? Glyma.17G024400 Secondary Identifier:  ? PAC:30480803
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G024400 0.5kb upstream 0.5kb upstream 5944   true Chr17: 1779409-1785352 Glycine max
Glyma.17G024400 0.5kb upstream 0.5kb upstream 500   false Chr17: 1784853-1785352 Glycine max
Glyma.17G024400 0.5kb downstream 0.5kb downstream 5944   true Chr17: 1778909-1784852 Glycine max
Glyma.17G024400 0.5kb downstream 0.5kb downstream 500   false Chr17: 1778909-1779408 Glycine max
Glyma.17G024400 1.0kb upstream 1.0kb upstream 6444   true Chr17: 1779409-1785852 Glycine max
Glyma.17G024400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1784853-1785852 Glycine max
Glyma.17G024400 1.0kb downstream 1.0kb downstream 6444   true Chr17: 1778409-1784852 Glycine max
Glyma.17G024400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1778409-1779408 Glycine max
Glyma.17G024400 2.0kb upstream 2.0kb upstream 7444   true Chr17: 1779409-1786852 Glycine max
Glyma.17G024400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1784853-1786852 Glycine max
Glyma.17G024400 2.0kb downstream 2.0kb downstream 7444   true Chr17: 1777409-1784852 Glycine max
Glyma.17G024400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1777409-1779408 Glycine max
Glyma.17G024400 5.0kb upstream 5.0kb upstream 10444   true Chr17: 1779409-1789852 Glycine max
Glyma.17G024400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1784853-1789852 Glycine max
Glyma.17G024400 5.0kb downstream 5.0kb downstream 10444   true Chr17: 1774409-1784852 Glycine max
Glyma.17G024400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1774409-1779408 Glycine max
Glyma.17G024400 10.0kb upstream 10.0kb upstream 15444   true Chr17: 1779409-1794852 Glycine max
Glyma.17G024400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1784853-1794852 Glycine max
Glyma.17G024400 10.0kb downstream 10.0kb downstream 15444   true Chr17: 1769409-1784852 Glycine max
Glyma.17G024400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1769409-1779408 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306866 5265 Fabidae View MSA
124065869 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.78378 0.0 10.961   Low
cufflinks 8.40898 0.0 33.0746   High
cufflinks 3.61754 0.0 15.1493   Low
cufflinks 9.43887 0.0 32.8616   High
cufflinks 5.85801 0.0 21.5074    
cufflinks 5.15435 0.0 24.072    
cufflinks 5.35364 0.0 22.8344    
cufflinks 6.19672 0.0 19.8956    
cufflinks 5.28105 0.0 20.1794    
cufflinks 1.082        
cufflinks 0.051     Low Low
cufflinks 0.533        
cufflinks 0.352        
cufflinks 0.334        
cufflinks 0.56        
cufflinks 0.672        
cufflinks 0.195        
cufflinks 0.836        
cufflinks 1.246       High
cufflinks 0.751        
cufflinks 0.078       Low
cufflinks 0.797        
cufflinks 0.929        
cufflinks 0.033     Low Low
cufflinks 0.75        
cufflinks 0.131        

0 Strain