Gene : Glyma.17G025800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21136:SF72 - VESICLE-ASSOCIATED MEMBRANE PROTEIN 724 Genomic Order:  258
Name:  ? Glyma.17G025800 Secondary Identifier:  ? PAC:30482024
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G025800 0.5kb upstream 0.5kb upstream 3539   true Chr17: 1901631-1905169 Glycine max
Glyma.17G025800 0.5kb upstream 0.5kb upstream 500   false Chr17: 1904670-1905169 Glycine max
Glyma.17G025800 0.5kb downstream 0.5kb downstream 3539   true Chr17: 1901131-1904669 Glycine max
Glyma.17G025800 0.5kb downstream 0.5kb downstream 500   false Chr17: 1901131-1901630 Glycine max
Glyma.17G025800 1.0kb upstream 1.0kb upstream 4039   true Chr17: 1901631-1905669 Glycine max
Glyma.17G025800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1904670-1905669 Glycine max
Glyma.17G025800 1.0kb downstream 1.0kb downstream 4039   true Chr17: 1900631-1904669 Glycine max
Glyma.17G025800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1900631-1901630 Glycine max
Glyma.17G025800 2.0kb upstream 2.0kb upstream 5039   true Chr17: 1901631-1906669 Glycine max
Glyma.17G025800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1904670-1906669 Glycine max
Glyma.17G025800 2.0kb downstream 2.0kb downstream 5039   true Chr17: 1899631-1904669 Glycine max
Glyma.17G025800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1899631-1901630 Glycine max
Glyma.17G025800 5.0kb upstream 5.0kb upstream 8039   true Chr17: 1901631-1909669 Glycine max
Glyma.17G025800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1904670-1909669 Glycine max
Glyma.17G025800 5.0kb downstream 5.0kb downstream 8039   true Chr17: 1896631-1904669 Glycine max
Glyma.17G025800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1896631-1901630 Glycine max
Glyma.17G025800 10.0kb upstream 10.0kb upstream 13039   true Chr17: 1901631-1914669 Glycine max
Glyma.17G025800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1904670-1914669 Glycine max
Glyma.17G025800 10.0kb downstream 10.0kb downstream 13039   true Chr17: 1891631-1904669 Glycine max
Glyma.17G025800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1891631-1901630 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312671 5265 Fabidae View MSA
124062902 5270 Rosid View MSA
123746359 5271 Pentapetalae View MSA
122791516 5272 Eudicot View MSA
122043607 5273 Angiosperm View MSA
121310156 5274 Embryophyte View MSA
123347724 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.39171 0.0 28.2867    
cufflinks 5.57325 0.0 27.689    
cufflinks 5.23009 0.0 24.1964    
cufflinks 8.53855 0.0 37.7996   High
cufflinks 4.74606 0.0 22.8487   Low
cufflinks 5.98828 0.0 27.049    
cufflinks 5.28962 0.0 25.4901    
cufflinks 7.94954 0.0 31.8784   High
cufflinks 4.71591 0.0 14.8421   Low
cufflinks 1.631        
cufflinks 1.57        
cufflinks 1.682       High
cufflinks 1.094       Low
cufflinks 0.943       Low
cufflinks 1.185        
cufflinks 1.247        
cufflinks 1.277        
cufflinks 1.778       High
cufflinks 1.346        
cufflinks 1.436        
cufflinks 1.539        
cufflinks 1.334        
cufflinks 1.198        
cufflinks 1.717       High
cufflinks 1.435        
cufflinks 0.9       Low

0 Strain