Gene : Glyma.17G026900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24412:SF142 - BTB/POZ DOMAIN-CONTAINING PROTEIN Genomic Order:  269
Name:  ? Glyma.17G026900 Secondary Identifier:  ? PAC:30479865
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G026900 0.5kb upstream 0.5kb upstream 6227   true Chr17: 1982657-1988883 Glycine max
Glyma.17G026900 0.5kb upstream 0.5kb upstream 500   false Chr17: 1982657-1983156 Glycine max
Glyma.17G026900 0.5kb downstream 0.5kb downstream 6227   true Chr17: 1983157-1989383 Glycine max
Glyma.17G026900 0.5kb downstream 0.5kb downstream 500   false Chr17: 1988884-1989383 Glycine max
Glyma.17G026900 1.0kb upstream 1.0kb upstream 6727   true Chr17: 1982157-1988883 Glycine max
Glyma.17G026900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1982157-1983156 Glycine max
Glyma.17G026900 1.0kb downstream 1.0kb downstream 6727   true Chr17: 1983157-1989883 Glycine max
Glyma.17G026900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1988884-1989883 Glycine max
Glyma.17G026900 2.0kb upstream 2.0kb upstream 7727   true Chr17: 1981157-1988883 Glycine max
Glyma.17G026900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1981157-1983156 Glycine max
Glyma.17G026900 2.0kb downstream 2.0kb downstream 7727   true Chr17: 1983157-1990883 Glycine max
Glyma.17G026900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1988884-1990883 Glycine max
Glyma.17G026900 5.0kb upstream 5.0kb upstream 10727   true Chr17: 1978157-1988883 Glycine max
Glyma.17G026900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1978157-1983156 Glycine max
Glyma.17G026900 5.0kb downstream 5.0kb downstream 10727   true Chr17: 1983157-1993883 Glycine max
Glyma.17G026900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1988884-1993883 Glycine max
Glyma.17G026900 10.0kb upstream 10.0kb upstream 15727   true Chr17: 1973157-1988883 Glycine max
Glyma.17G026900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1973157-1983156 Glycine max
Glyma.17G026900 10.0kb downstream 10.0kb downstream 15727   true Chr17: 1983157-1998883 Glycine max
Glyma.17G026900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1988884-1998883 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301950 5265 Fabidae View MSA
124063490 5270 Rosid View MSA
123739254 5271 Pentapetalae View MSA
122791081 5272 Eudicot View MSA
122042237 5273 Angiosperm View MSA
121345502 5274 Embryophyte View MSA
123426971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.36481 0.0 11.9752   Low
cufflinks 4.30502 0.0 11.8283   Low
cufflinks 4.16665 0.0 11.4553   Low
cufflinks 8.20733 0.0 21.9081   High
cufflinks 5.7763 0.0 15.5785    
cufflinks 5.2117 0.0 14.1235    
cufflinks 7.73557 0.0 20.6702   High
cufflinks 7.47838 0.0 19.9937    
cufflinks 6.15336 0.0 16.5487    
cufflinks 2.885        
cufflinks 1.157       Low
cufflinks 3.635        
cufflinks 3.814       High
cufflinks 4.224       High
cufflinks 0.887       Low
cufflinks 2.476        
cufflinks 1.33       Low
cufflinks 4.41       High
cufflinks 3.573        
cufflinks 2.56        
cufflinks 1.418       Low
cufflinks 2.874        
cufflinks 2.404        
cufflinks 2.18        
cufflinks 2.311        
cufflinks 1.705        

0 Strain