Gene : Glyma.17G027600 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  276
Name:  ? Glyma.17G027600 Secondary Identifier:  ? PAC:30480169
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ILEUDEG-PWY Glycine max pathologic  
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-5137 Glycine max pathologic  
Gmax PWY-5138 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-6435 Glycine max pathologic  
Gmax PWY-6837 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-735 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G027600 0.5kb upstream 0.5kb upstream 8210   true Chr17: 2043940-2052149 Glycine max
Glyma.17G027600 0.5kb upstream 0.5kb upstream 500   false Chr17: 2051650-2052149 Glycine max
Glyma.17G027600 0.5kb downstream 0.5kb downstream 8210   true Chr17: 2043440-2051649 Glycine max
Glyma.17G027600 0.5kb downstream 0.5kb downstream 500   false Chr17: 2043440-2043939 Glycine max
Glyma.17G027600 1.0kb upstream 1.0kb upstream 8710   true Chr17: 2043940-2052649 Glycine max
Glyma.17G027600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2051650-2052649 Glycine max
Glyma.17G027600 1.0kb downstream 1.0kb downstream 8710   true Chr17: 2042940-2051649 Glycine max
Glyma.17G027600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2042940-2043939 Glycine max
Glyma.17G027600 2.0kb upstream 2.0kb upstream 9710   true Chr17: 2043940-2053649 Glycine max
Glyma.17G027600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2051650-2053649 Glycine max
Glyma.17G027600 2.0kb downstream 2.0kb downstream 9710   true Chr17: 2041940-2051649 Glycine max
Glyma.17G027600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2041940-2043939 Glycine max
Glyma.17G027600 5.0kb upstream 5.0kb upstream 12710   true Chr17: 2043940-2056649 Glycine max
Glyma.17G027600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2051650-2056649 Glycine max
Glyma.17G027600 5.0kb downstream 5.0kb downstream 12710   true Chr17: 2038940-2051649 Glycine max
Glyma.17G027600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2038940-2043939 Glycine max
Glyma.17G027600 10.0kb upstream 10.0kb upstream 17710   true Chr17: 2043940-2061649 Glycine max
Glyma.17G027600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2051650-2061649 Glycine max
Glyma.17G027600 10.0kb downstream 10.0kb downstream 17710   true Chr17: 2033940-2051649 Glycine max
Glyma.17G027600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2033940-2043939 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254946 5265 Fabidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.47868 0.0 10.002   Low
cufflinks 18.0211 0.0 48.5497    
cufflinks 3.43237 0.0 9.84024   Low
cufflinks 6.9377 0.0 18.7588    
cufflinks 25.6441 0.0 70.656 High High
cufflinks 19.3552 0.0 52.3464   High
cufflinks 10.4581 0.0 27.924    
cufflinks 5.90383 0.0 16.1163    
cufflinks 6.20824 0.0 16.8951    
cufflinks 6.639        
cufflinks 1.107       Low
cufflinks 4.24        
cufflinks 9.392     High High
cufflinks 11.234     High High
cufflinks 0.538       Low
cufflinks 2.665        
cufflinks 2.358        
cufflinks 6.263        
cufflinks 23.167     High High
cufflinks 1.987        
cufflinks 1.372        
cufflinks 2.351        
cufflinks 10.871     High High
cufflinks 0.762       Low
cufflinks 2.229        
cufflinks 2.758        

0 Strain