Gene : Glyma.17G027700 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  277
Name:  ? Glyma.17G027700 Secondary Identifier:  ? PAC:30482027
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ILEUDEG-PWY Glycine max pathologic  
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-5137 Glycine max pathologic  
Gmax PWY-5138 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-6435 Glycine max pathologic  
Gmax PWY-6837 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-735 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G027700 0.5kb upstream 0.5kb upstream 7889   true Chr17: 2057359-2065247 Glycine max
Glyma.17G027700 0.5kb upstream 0.5kb upstream 500   false Chr17: 2064748-2065247 Glycine max
Glyma.17G027700 0.5kb downstream 0.5kb downstream 7889   true Chr17: 2056859-2064747 Glycine max
Glyma.17G027700 0.5kb downstream 0.5kb downstream 500   false Chr17: 2056859-2057358 Glycine max
Glyma.17G027700 1.0kb upstream 1.0kb upstream 8389   true Chr17: 2057359-2065747 Glycine max
Glyma.17G027700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2064748-2065747 Glycine max
Glyma.17G027700 1.0kb downstream 1.0kb downstream 8389   true Chr17: 2056359-2064747 Glycine max
Glyma.17G027700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2056359-2057358 Glycine max
Glyma.17G027700 2.0kb upstream 2.0kb upstream 9389   true Chr17: 2057359-2066747 Glycine max
Glyma.17G027700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2064748-2066747 Glycine max
Glyma.17G027700 2.0kb downstream 2.0kb downstream 9389   true Chr17: 2055359-2064747 Glycine max
Glyma.17G027700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2055359-2057358 Glycine max
Glyma.17G027700 5.0kb upstream 5.0kb upstream 12389   true Chr17: 2057359-2069747 Glycine max
Glyma.17G027700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2064748-2069747 Glycine max
Glyma.17G027700 5.0kb downstream 5.0kb downstream 12389   true Chr17: 2052359-2064747 Glycine max
Glyma.17G027700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2052359-2057358 Glycine max
Glyma.17G027700 10.0kb upstream 10.0kb upstream 17389   true Chr17: 2057359-2074747 Glycine max
Glyma.17G027700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2064748-2074747 Glycine max
Glyma.17G027700 10.0kb downstream 10.0kb downstream 17389   true Chr17: 2047359-2064747 Glycine max
Glyma.17G027700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2047359-2057358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301704 5265 Fabidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3705 0.0 35.875    
cufflinks 7.62815 0.0 20.4002    
cufflinks 35.5068 0.0 104.749 High High
cufflinks 9.38248 0.0 25.0314    
cufflinks 9.32621 0.0 24.8828    
cufflinks 16.8176 0.0 45.654    
cufflinks 8.12739 0.0 21.72    
cufflinks 9.89101 0.0 26.391    
cufflinks 10.1385 0.0 27.0552    
cufflinks 5.236        
cufflinks 14.53     High High
cufflinks 12.76     High High
cufflinks 7.648     High  
cufflinks 7.042     High  
cufflinks 6.346     High  
cufflinks 4.638        
cufflinks 4.617        
cufflinks 10.092     High High
cufflinks 4.757        
cufflinks 5.774        
cufflinks 6.264     High  
cufflinks 6.063        
cufflinks 3.675       Low
cufflinks 10.577     High High
cufflinks 4.999        
cufflinks 6.691     High  

0 Strain