Gene : Glyma.17G028000 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.3.1.168 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase / Dihydrolipoyl transacylase Genomic Order:  280
Name:  ? Glyma.17G028000 Secondary Identifier:  ? PAC:30481143
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5046 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G028000 0.5kb upstream 0.5kb upstream 4663   true Chr17: 2092440-2097102 Glycine max
Glyma.17G028000 0.5kb upstream 0.5kb upstream 500   false Chr17: 2092440-2092939 Glycine max
Glyma.17G028000 0.5kb downstream 0.5kb downstream 4663   true Chr17: 2092940-2097602 Glycine max
Glyma.17G028000 0.5kb downstream 0.5kb downstream 500   false Chr17: 2097103-2097602 Glycine max
Glyma.17G028000 1.0kb upstream 1.0kb upstream 5163   true Chr17: 2091940-2097102 Glycine max
Glyma.17G028000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2091940-2092939 Glycine max
Glyma.17G028000 1.0kb downstream 1.0kb downstream 5163   true Chr17: 2092940-2098102 Glycine max
Glyma.17G028000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2097103-2098102 Glycine max
Glyma.17G028000 2.0kb upstream 2.0kb upstream 6163   true Chr17: 2090940-2097102 Glycine max
Glyma.17G028000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2090940-2092939 Glycine max
Glyma.17G028000 2.0kb downstream 2.0kb downstream 6163   true Chr17: 2092940-2099102 Glycine max
Glyma.17G028000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2097103-2099102 Glycine max
Glyma.17G028000 5.0kb upstream 5.0kb upstream 9163   true Chr17: 2087940-2097102 Glycine max
Glyma.17G028000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2087940-2092939 Glycine max
Glyma.17G028000 5.0kb downstream 5.0kb downstream 9163   true Chr17: 2092940-2102102 Glycine max
Glyma.17G028000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2097103-2102102 Glycine max
Glyma.17G028000 10.0kb upstream 10.0kb upstream 14163   true Chr17: 2082940-2097102 Glycine max
Glyma.17G028000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2082940-2092939 Glycine max
Glyma.17G028000 10.0kb downstream 10.0kb downstream 14163   true Chr17: 2092940-2107102 Glycine max
Glyma.17G028000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2097103-2107102 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304967 5265 Fabidae View MSA
124066598 5270 Rosid View MSA
123740917 5271 Pentapetalae View MSA
122788338 5272 Eudicot View MSA
122046167 5273 Angiosperm View MSA
121344663 5274 Embryophyte View MSA
123425518 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0411 0.0 82.6226    
cufflinks 7.30229 0.0 33.5017    
cufflinks 123.249 0.0 761.085 High High
cufflinks 9.39739 0.0 40.0295    
cufflinks 10.2891 0.0 44.3222    
cufflinks 23.5578 0.0 96.7274 High  
cufflinks 11.1363 0.0 46.6482    
cufflinks 6.55392 0.0 27.4514    
cufflinks 12.111 0.0 50.4444    
cufflinks 2.74       Low
cufflinks 54.01     High High
cufflinks 13.431     High  
cufflinks 4.373        
cufflinks 4.866        
cufflinks 48.105     High High
cufflinks 8.988     High  
cufflinks 1.837       Low
cufflinks 4.856        
cufflinks 2.989        
cufflinks 9.755     High  
cufflinks 33.774     High High
cufflinks 4.632        
cufflinks 2.212       Low
cufflinks 43.915     High High
cufflinks 11.305     High  
cufflinks 15.847     High  

0 Strain