Gene : Glyma.17G028200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10992:SF829 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  282
Name:  ? Glyma.17G028200 Secondary Identifier:  ? PAC:30480013
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G028200 0.5kb upstream 0.5kb upstream 3250   true Chr17: 2100648-2103897 Glycine max
Glyma.17G028200 0.5kb upstream 0.5kb upstream 500   false Chr17: 2103398-2103897 Glycine max
Glyma.17G028200 0.5kb downstream 0.5kb downstream 3250   true Chr17: 2100148-2103397 Glycine max
Glyma.17G028200 0.5kb downstream 0.5kb downstream 500   false Chr17: 2100148-2100647 Glycine max
Glyma.17G028200 1.0kb upstream 1.0kb upstream 3750   true Chr17: 2100648-2104397 Glycine max
Glyma.17G028200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2103398-2104397 Glycine max
Glyma.17G028200 1.0kb downstream 1.0kb downstream 3750   true Chr17: 2099648-2103397 Glycine max
Glyma.17G028200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2099648-2100647 Glycine max
Glyma.17G028200 2.0kb upstream 2.0kb upstream 4750   true Chr17: 2100648-2105397 Glycine max
Glyma.17G028200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2103398-2105397 Glycine max
Glyma.17G028200 2.0kb downstream 2.0kb downstream 4750   true Chr17: 2098648-2103397 Glycine max
Glyma.17G028200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2098648-2100647 Glycine max
Glyma.17G028200 5.0kb upstream 5.0kb upstream 7750   true Chr17: 2100648-2108397 Glycine max
Glyma.17G028200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2103398-2108397 Glycine max
Glyma.17G028200 5.0kb downstream 5.0kb downstream 7750   true Chr17: 2095648-2103397 Glycine max
Glyma.17G028200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2095648-2100647 Glycine max
Glyma.17G028200 10.0kb upstream 10.0kb upstream 12750   true Chr17: 2100648-2113397 Glycine max
Glyma.17G028200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2103398-2113397 Glycine max
Glyma.17G028200 10.0kb downstream 10.0kb downstream 12750   true Chr17: 2090648-2103397 Glycine max
Glyma.17G028200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2090648-2100647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302686 5265 Fabidae View MSA
124073968 5270 Rosid View MSA
123753731 5271 Pentapetalae View MSA
122797464 5272 Eudicot View MSA
122048317 5273 Angiosperm View MSA
121350618 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.4779 0.0 47.3384   Low
cufflinks 3.82455 0.0 25.3275   Low
cufflinks 9.00222 0.0 38.8987   High
cufflinks 7.0014 0.0 34.2383    
cufflinks 5.43936 0.0 37.9364    
cufflinks 4.02334 0.0 37.3181    
cufflinks 5.06559 0.0 50.5694    
cufflinks 10.2148 0.0 42.5147   High
cufflinks 5.87518 0.0 33.3093    
cufflinks 1.403       High
cufflinks 0.224        
cufflinks 1.121       High
cufflinks 0.934       High
cufflinks 0.305        
cufflinks 0.008     Low Low
cufflinks 0.147        
cufflinks 0.203        
cufflinks 0.975       High
cufflinks 0.213        
cufflinks 0.161        
cufflinks 0.378        
cufflinks 0.154        
cufflinks 0.224        
cufflinks 0.076        
cufflinks 0.136        
cufflinks 0.453        

0 Strain