Gene : Glyma.17G016100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Genomic Order:  161
Name:  ? Glyma.17G016100 Secondary Identifier:  ? PAC:30480560
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G016100 0.5kb upstream 0.5kb upstream 4989   true Chr17: 1196129-1201117 Glycine max
Glyma.17G016100 0.5kb upstream 0.5kb upstream 500   false Chr17: 1200618-1201117 Glycine max
Glyma.17G016100 0.5kb downstream 0.5kb downstream 4989   true Chr17: 1195629-1200617 Glycine max
Glyma.17G016100 0.5kb downstream 0.5kb downstream 500   false Chr17: 1195629-1196128 Glycine max
Glyma.17G016100 1.0kb upstream 1.0kb upstream 5489   true Chr17: 1196129-1201617 Glycine max
Glyma.17G016100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1200618-1201617 Glycine max
Glyma.17G016100 1.0kb downstream 1.0kb downstream 5489   true Chr17: 1195129-1200617 Glycine max
Glyma.17G016100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1195129-1196128 Glycine max
Glyma.17G016100 2.0kb upstream 2.0kb upstream 6489   true Chr17: 1196129-1202617 Glycine max
Glyma.17G016100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1200618-1202617 Glycine max
Glyma.17G016100 2.0kb downstream 2.0kb downstream 6489   true Chr17: 1194129-1200617 Glycine max
Glyma.17G016100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1194129-1196128 Glycine max
Glyma.17G016100 5.0kb upstream 5.0kb upstream 9489   true Chr17: 1196129-1205617 Glycine max
Glyma.17G016100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1200618-1205617 Glycine max
Glyma.17G016100 5.0kb downstream 5.0kb downstream 9489   true Chr17: 1191129-1200617 Glycine max
Glyma.17G016100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1191129-1196128 Glycine max
Glyma.17G016100 10.0kb upstream 10.0kb upstream 14489   true Chr17: 1196129-1210617 Glycine max
Glyma.17G016100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1200618-1210617 Glycine max
Glyma.17G016100 10.0kb downstream 10.0kb downstream 14489   true Chr17: 1186129-1200617 Glycine max
Glyma.17G016100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1186129-1196128 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311421 5265 Fabidae View MSA
124061759 5270 Rosid View MSA
123738358 5271 Pentapetalae View MSA
122797370 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30781 0.0 7.28879    
cufflinks 2.6269 0.0 8.10439   High
cufflinks 1.44816 0.0 7.4879    
cufflinks 0.97356 0.0 3.87903    
cufflinks 0.540458 0.0 2.4513   Low
cufflinks 0.595199 0.0 2.6463   Low
cufflinks 2.42906 0.0 7.64934   High
cufflinks 1.39455 0.0 5.17544    
cufflinks 0.571537 0.0 3.47633   Low
cufflinks 0.526        
cufflinks 0.063        
cufflinks 0.607        
cufflinks 0.273        
cufflinks 0.205        
cufflinks 0.004     Low Low
cufflinks 1.548        
cufflinks 0.078        
cufflinks 0.791        
cufflinks 0.821        
cufflinks 2.097       High
cufflinks 0.065        
cufflinks 1.872       High
cufflinks 1.319        
cufflinks 0.047     Low Low
cufflinks 1.727       High
cufflinks 0.101        

0 Strain