Gene : Glyma.17G016300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11772:SF18 - ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS Genomic Order:  163
Name:  ? Glyma.17G016300 Secondary Identifier:  ? PAC:30480956
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G016300 0.5kb upstream 0.5kb upstream 4354   true Chr17: 1207437-1211790 Glycine max
Glyma.17G016300 0.5kb upstream 0.5kb upstream 500   false Chr17: 1211291-1211790 Glycine max
Glyma.17G016300 0.5kb downstream 0.5kb downstream 4354   true Chr17: 1206937-1211290 Glycine max
Glyma.17G016300 0.5kb downstream 0.5kb downstream 500   false Chr17: 1206937-1207436 Glycine max
Glyma.17G016300 1.0kb upstream 1.0kb upstream 4854   true Chr17: 1207437-1212290 Glycine max
Glyma.17G016300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1211291-1212290 Glycine max
Glyma.17G016300 1.0kb downstream 1.0kb downstream 4854   true Chr17: 1206437-1211290 Glycine max
Glyma.17G016300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1206437-1207436 Glycine max
Glyma.17G016300 2.0kb upstream 2.0kb upstream 5854   true Chr17: 1207437-1213290 Glycine max
Glyma.17G016300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1211291-1213290 Glycine max
Glyma.17G016300 2.0kb downstream 2.0kb downstream 5854   true Chr17: 1205437-1211290 Glycine max
Glyma.17G016300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1205437-1207436 Glycine max
Glyma.17G016300 5.0kb upstream 5.0kb upstream 8854   true Chr17: 1207437-1216290 Glycine max
Glyma.17G016300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1211291-1216290 Glycine max
Glyma.17G016300 5.0kb downstream 5.0kb downstream 8854   true Chr17: 1202437-1211290 Glycine max
Glyma.17G016300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1202437-1207436 Glycine max
Glyma.17G016300 10.0kb upstream 10.0kb upstream 13854   true Chr17: 1207437-1221290 Glycine max
Glyma.17G016300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1211291-1221290 Glycine max
Glyma.17G016300 10.0kb downstream 10.0kb downstream 13854   true Chr17: 1197437-1211290 Glycine max
Glyma.17G016300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1197437-1207436 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311445 5265 Fabidae View MSA
124063180 5270 Rosid View MSA
123737822 5271 Pentapetalae View MSA
122787966 5272 Eudicot View MSA
122049991 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.8289 0.0 109.094 High  
cufflinks 30.5284 0.0 81.525 High Low
cufflinks 39.0884 0.0 104.366 High  
cufflinks 179.257 0.0 553.063 High  
cufflinks 312.12 0.0 1092.07 High  
cufflinks 57.4003 0.0 155.409 High  
cufflinks 47.9699 0.0 128.8 High  
cufflinks 383.517 0.0 1399.76 High High
cufflinks 688.877 0.0 3035.4 High High
cufflinks 33.901     High  
cufflinks 204.633     High High
cufflinks 11.719     High  
cufflinks 28.661     High  
cufflinks 62.089     High  
cufflinks 509.455     High High
cufflinks 4.704       Low
cufflinks 26.291     High  
cufflinks 12.749     High  
cufflinks 5.136       Low
cufflinks 5.357       Low
cufflinks 212.679     High High
cufflinks 5.379       Low
cufflinks 5.989        
cufflinks 206.244     High High
cufflinks 4.773       Low
cufflinks 120.286     High  

0 Strain