Gene : Glyma.17G017400 G. max Wm82.a2.v1
Defline:  (1 of 10) 2.5.1.27 - Adenylate dimethylallyltransferase (AMP-dependent) / Isopentenyltransferase Genomic Order:  174
Name:  ? Glyma.17G017400 Secondary Identifier:  ? PAC:30479491
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2681 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G017400 0.5kb upstream 0.5kb upstream 2538   true Chr17: 1313258-1315795 Glycine max
Glyma.17G017400 0.5kb upstream 0.5kb upstream 500   false Chr17: 1313258-1313757 Glycine max
Glyma.17G017400 0.5kb downstream 0.5kb downstream 2538   true Chr17: 1313758-1316295 Glycine max
Glyma.17G017400 0.5kb downstream 0.5kb downstream 500   false Chr17: 1315796-1316295 Glycine max
Glyma.17G017400 1.0kb upstream 1.0kb upstream 3038   true Chr17: 1312758-1315795 Glycine max
Glyma.17G017400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1312758-1313757 Glycine max
Glyma.17G017400 1.0kb downstream 1.0kb downstream 3038   true Chr17: 1313758-1316795 Glycine max
Glyma.17G017400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1315796-1316795 Glycine max
Glyma.17G017400 2.0kb upstream 2.0kb upstream 4038   true Chr17: 1311758-1315795 Glycine max
Glyma.17G017400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1311758-1313757 Glycine max
Glyma.17G017400 2.0kb downstream 2.0kb downstream 4038   true Chr17: 1313758-1317795 Glycine max
Glyma.17G017400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1315796-1317795 Glycine max
Glyma.17G017400 5.0kb upstream 5.0kb upstream 7038   true Chr17: 1308758-1315795 Glycine max
Glyma.17G017400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1308758-1313757 Glycine max
Glyma.17G017400 5.0kb downstream 5.0kb downstream 7038   true Chr17: 1313758-1320795 Glycine max
Glyma.17G017400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1315796-1320795 Glycine max
Glyma.17G017400 10.0kb upstream 10.0kb upstream 12038   true Chr17: 1303758-1315795 Glycine max
Glyma.17G017400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1303758-1313757 Glycine max
Glyma.17G017400 10.0kb downstream 10.0kb downstream 12038   true Chr17: 1313758-1325795 Glycine max
Glyma.17G017400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1315796-1325795 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313090 5265 Fabidae View MSA
124067788 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0873253 0.0 0.349987 Low  
cufflinks 0.118628 0.0 0.470794 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.260264 0.0 0.996928    
cufflinks 2.68556 0.0 8.68184   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0440068 0.0 0.182243 Low Low
cufflinks 2.89715 0.0 9.26103   High
cufflinks 0.081     Low  
cufflinks 0.097        
cufflinks 0.053     Low  
cufflinks 1.296       High
cufflinks 0.107        
cufflinks 0.009     Low Low
cufflinks 0.046     Low  
cufflinks 0.045     Low  
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.218        
cufflinks 0.023     Low  
cufflinks 0.111        
cufflinks 0.203        
cufflinks 0.017     Low Low
cufflinks 0.249       High

0 Strain